Pre_GI: BLASTP Hits

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Query: NC_004556:1178897:1178897 Xylella fastidiosa Temecula1, complete genome

Start: 1178897, End: 1179178, Length: 282

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010577:1188438:118843811884381188719282Xylella fastidiosa M23, complete genomehypothetical protein5e-48189
NC_006513:38818:531455314553426282Azoarcus sp. EbN1, complete genomehypothetical protein8e-39158
NC_007614:109000:123835123835124119285Nitrosospira multiformis ATCC 25196 chromosome 1, completetranscriptional regulator, XRE family2e-36150
NC_013889:1159343:117857811785781178859282Thioalkalivibrio sp. K90mix chromosome, complete genometranscriptional regulator, XRE family5e-34142
NC_011283:1307173:131747913174791318333855Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein7e-26115
NC_007606:1999870:200177620017762002066291Shigella dysenteriae Sd197, complete genomehypothetical protein5e-22102
NC_007492:3954345:395990839599083960219312Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-2097.8
NC_010397:1751067:177673017767301776981252Mycobacterium abscessus chromosome Chromosome, complete sequencehypothetical protein6e-2096.3
NC_016906:4562874:457355945735594574206648Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative DNA-binding protein1e-1891.7
NC_017986:3407913:342210534221053422866762Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-1891.7
NC_014972:409884:425323425323425604282Desulfobulbus propionicus DSM 2032 chromosome, complete genomeXRE family transcriptional regulator4e-1683.6
NC_014722:1191380:120512312051231205281159Burkholderia rhizoxinica HKI 454, complete genometranscriptional regulator5e-1683.2
NC_014032:825793:891972891972892427456Salinibacter ruber M8 chromosome, complete genomehypothetical protein3e-1580.1
NC_009339:252174:269580269580269858279Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencehelix-turn-helix domain-containing protein1e-1065.1
NC_014973:5099543:511415351141535114356204Geobacter sp. M18 chromosome, complete genome2e-0754.3
NC_012962:4942000:494243649424364942774339Photorhabdus asymbiotica, complete genomehypothetical protein2e-0651.2
NC_012918:3203136:321884232188423219189348Geobacter sp. M21 chromosome, complete genomeXRE family transcriptional regulator3e-0650.4