Pre_GI: BLASTP Hits

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Query: NC_004547:843475:856625 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 856625, End: 858271, Length: 1647

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4405301:4442217444221744439081692Salmonella enterica subsp. enterica serovar Choleraesuis strputative CPA1 family, Na:H transport protein0769
NC_011094:4361238:4398206439820643998521647Salmonella enterica subsp. enterica serovar Schwarzengrund strNa+/H+ antiporter0768
NC_007613:4119771:4136726413672641383751650Shigella boydii Sb227, complete genomehypothetical protein0757
NC_020181:3585898:3600246360024636018921647Enterobacter aerogenes EA1509E, complete genomePutative Na(+)/H(+) exchanger protein, CPA1 family precursor0753
NC_010067:3310336:3312463331246333141541692Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0744
NC_016612:1790256:1790256179025617918091554Klebsiella oxytoca KCTC 1686 chromosome, complete genomeNa+/H+ antiporter0727
NC_010995:1749054:1753438175343817550751638Cellvibrio japonicus Ueda107, complete genomeNa+/H+ antiporter1e-76288
NC_008702:369965:3699653699653716051641Azoarcus sp. BH72, complete genomeputative Na+/H+ antiporter5e-75282
NC_015634:2492771:2520388252038825224272040Bacillus coagulans 2-6 chromosome, complete genomeNa+/H+ antiporter3e-61236
NC_013061:2775623:2775623277562327771971575Pedobacter heparinus DSM 2366, complete genomeNa+/H+ antiporter1e-45184
NC_014169:2407266:2425094242509424271662073Bifidobacterium longum subsp. longum JDM301 chromosome, completesodium/hydrogen exchanger3e-41169
NC_014656:1704101:1704101170410117061732073Bifidobacterium longum subsp. longum BBMN68 chromosome, completenhap2e-40167
NC_014371:1358615:2740274043231584Prevotella melaninogenica ATCC 25845 chromosome chromosome II,Na+/H+ antiporter2e-39164
NC_006448:1451729:1456956145695614590222067Streptococcus thermophilus LMG 18311, complete genomeNa+:H+ antiporter4e-36153
NC_014815:2363460:2388658238865823902381581Micromonospora sp. L5 chromosome, complete genomena+/h+ antiporter4e-33143
NC_014815:1490957:1516053151605315177651713Micromonospora sp. L5 chromosome, complete genomena+/h+ antiporter3e-32140
NC_015312:5240653:5253897525389752554861590Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNa+/H+ antiporter1e-29132
NC_014494:614809:6148096148096168632055Streptococcus pneumoniae AP200 chromosome, complete genomeNhaP-type Na+/H+ and K+/H+ antiporter3e-27124
NC_015291:665714:6837776837776858312055Streptococcus oralis Uo5, complete genomeNa+/H+ antiporter2e-26120
NC_016605:272231:2932492932492952762028Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesodium/hydrogen exchanger family protein9e-22105
NC_019673:9084045:9095761909576190973021542Saccharothrix espanaensis DSM 44229 complete genomeCPA1 family transporter1e-21105
NC_016783:1169821:1189793118979311913671575Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative Na+/H+ antiporter3e-21103
NC_010546:1911366:1925526192552619270941569Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceNa+/H+ antiporter2e-1998.2
NC_013530:3082587:3085151308515130869561806Xylanimonas cellulosilytica DSM 15894, complete genomesodium/hydrogen exchanger4e-1790.1
NC_011206:1873297:1880250188025018814431194Acidithiobacillus ferrooxidans ATCC 53993, complete genomesodium/hydrogen exchanger4e-1583.2
NC_012984:2681548:2688351268835126899521602Lactobacillus plantarum JDM1, complete genomeNa(+)/H(+) antiporter3e-1480.9
NC_015387:261799:2617992617992630371239Marinithermus hydrothermalis DSM 14884 chromosome, complete genomesodium/hydrogen exchanger6e-1376.3
NC_010610:1178430:1227619122761912289771359Lactobacillus fermentum IFO 3956, complete genomeNa-H antiporter2e-1274.7
NC_012988:1777618:1808831180883118098801050Methylobacterium extorquens DM4, complete genomesodium/hydrogen exchanger8e-1272.4
NC_011004:4073916:4106218410621841074711254Rhodopseudomonas palustris TIE-1, complete genomesodium/hydrogen exchanger1e-1172
NC_011184:325797:3473403473403485391200Vibrio fischeri MJ11 chromosome I, complete sequenceNhaP-type Na+/H+ and K+/H+ antiporter1e-1171.6
NC_017143:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-010, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_013210:57881:6150661506627681263Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_017101:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_017117:54767:6113461134623961263Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-010, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_017130:54759:6112661126623881263Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_017134:54783:6115061150624121263Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_017136:54751:6111861118623801263Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, completeNa+/H+ antiporter NhaA/NhaP5e-1169.7
NC_016027:2446806:2460592246059224618541263Gluconacetobacter xylinus NBRC 3288, complete genomeNa+/H+ antiporter1e-1068.6
NC_011757:3540992:3540992354099235422541263Methylobacterium chloromethanicum CM4, complete genomesodium/hydrogen exchanger1e-1068.6
NC_016901:1527877:1534474153447415357781305Shewanella baltica OS678 chromosome, complete genomesodium/hydrogen exchanger6e-1066.2
NC_009665:1495473:1502903150290315042071305Shewanella baltica OS185 chromosome, complete genomesodium/hydrogen exchanger9e-1065.9
NC_008369:291640:2916402916402929381299Francisella tularensis subsp. holarctica OSU18, complete genomeCPA1 family monovalent cation:proton (H+) antiporter-18e-1065.9
NC_007880:290059:2900592900592913571299Francisella tularensis subsp. holarctica, complete genomeNa+/H+ antiporter8e-1065.9
NC_009052:1394000:1400146140014614014501305Shewanella baltica OS155, complete genomesodium/hydrogen exchanger8e-1065.9
NC_008601:1560482:1595030159503015963281299Francisella tularensis subsp. novicida U112, complete genomemonovalent cation:proton antiporter-17e-1065.9
NC_013851:2610847:2634772263477226360581287Allochromatium vinosum DSM 180 chromosome, complete genomesodium/hydrogen exchanger1e-0965.5
NC_009749:289695:2896952896952907411047Francisella tularensis subsp. holarctica FTA, complete genomeNa+/H+ antiporter1e-0965.5
NC_006570:1526071:1543156154315615444541299Francisella tularensis subsp. tularensis Schu 4, complete genomeNa+/H+ antiporter1e-0965.1
NC_008245:1525877:1542962154296215442601299Francisella tularensis subsp. tularensis FSC 198, complete genomeNa+/H+ antiporter1e-0965.1
NC_009257:775538:7787337787337800311299Francisella tularensis subsp. tularensis WY96-3418 chromosome,monovalent cation:proton antiporter family protein1e-0965.1
NC_016933:1601821:1618906161890616202041299Francisella tularensis TIGB03 chromosome, complete genomeH+ antiporter NhaP1e-0965.1
NC_016937:1525914:1542999154299915442971299Francisella tularensis subsp. tularensis TI0902 chromosome,H+ antiporter NhaP1e-0965.1
NC_009952:2217877:2234212223421222367192508Dinoroseobacter shibae DFL 12, complete genomehypothetical protein2e-0964.7
NC_015497:3497680:3515092351509235163751284Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomesodium/hydrogen exchanger2e-0964.7
NC_006677:1503513:1507798150779815089461149Gluconobacter oxydans 621H, complete genomeNa+/H+ Antiporter NhaA8e-0962.4
NC_010511:6067000:6107967610796761094871521Methylobacterium sp. 4-46 chromosome, complete genomesodium/hydrogen exchanger5e-0859.7
NC_012560:3282704:3287924328792432891951272Azotobacter vinelandii DJ, complete genomeNa+/H+ antiporter NhaP protein8e-0858.9
NC_021150:3282702:3287922328792232891931272Azotobacter vinelandii CA6, complete genomeNa+/H+ antiporter NhaP protein8e-0858.9
NC_002971:1523065:1535813153581315370661254Coxiella burnetii RSA 493, complete genomemonovalent cation/proton antiporter subunit, putative9e-0858.9