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Query: NC_004547:843475:847174 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 847174, End: 847857, Length: 684

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3827390:385306538530653853736672Dickeya dadantii Ech703, complete genomeLysine exporter protein (LYSE/YGGA)1e-61235
NC_012912:3853377:388986838898683890539672Dickeya zeae Ech1591, complete genomeLysine exporter protein (LYSE/YGGA)3e-61234
NC_013592:713036:715919715919716590672Dickeya dadantii Ech586, complete genomeLysine exporter protein (LYSE/YGGA)9e-61233
NC_007510:973828:974480974480975202723Burkholderia sp. 383 chromosome 1, complete sequenceLysine exporter family protein (LYSE/YGGA)4e-29128
NC_008027:4280000:429878242987824299423642Pseudomonas entomophila L48, complete genometransporter, LysE family3e-27121
NC_016818:3887000:392298339229833923621639Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative threonine efflux protein4e-26118