Pre_GI: BLASTP Hits

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Query: NC_004547:639726:642137 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 642137, End: 642508, Length: 372

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:345084:349400349400349771372Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-24112
NC_015567:346500:349565349565349936372Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-24112
NC_009832:4564752:461736246173624617733372Serratia proteamaculans 568, complete genomehypothetical protein3e-23107
NC_012779:346998:358123358123358476354Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-2096.7
NC_014228:3353896:336769733676973368041345Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-1476.6
NC_014228:3442159:345742134574213457765345Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-1374.3
NC_013892:1457500:146180114618011462136336Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-0960.8
NC_014228:3391500:339860933986093398953345Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0857.8
NC_012125:4536383:453918245391824539514333Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-0857
NC_003198:4453457:445625644562564456588333Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-0857
NC_010554:2789722:280867928086792809017339Proteus mirabilis HI4320, complete genomehypothetical protein3e-0753.9