Pre_GI: BLASTP Hits

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Query: NC_004547:611178:630682 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 630682, End: 631023, Length: 342

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1223042:125239312523931252794402Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-22102
NC_013892:3278647:330530433053043305681378Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1787.4
NC_013892:1483000:149235514923551492663309Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-1682.4
NC_014228:3534378:353930135393013539609309Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1581.6
NC_009708:4182460:418913141891314189481351Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-1580.1
NC_009832:4521585:455013245501324550497366Serratia proteamaculans 568, complete genomehypothetical protein7e-1475.9
NC_014029:331919:366559366559366924366Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-1272
NC_015566:316340:336174336174336539366Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element membrane protein3e-1167
NC_011901:2983555:299427329942732994641369Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-0652
NC_009138:1974935:202265720226572023016360Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-0651.2
NC_011992:1213726:123243912324391232798360Acidovorax ebreus TPSY, complete genomehypothetical protein2e-0651.2
NC_010170:1498253:153799415379941538359366Bordetella petrii, complete genomehypothetical protein2e-0650.8
NC_006513:1379735:144237614423761442744369Azoarcus sp. EbN1, complete genomehypothetical protein2e-0650.8
NC_015422:1876102:189660818966081896976369Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element membrane protein3e-0650.8
NC_011662:1041725:104517110451711045539369Thauera sp. MZ1T, complete genomehypothetical protein3e-0650.4