Pre_GI: BLASTP Hits

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Query: NC_004547:611178:630094 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 630094, End: 630414, Length: 321

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:316340:335541335541335876336Serratia sp. AS12 chromosome, complete genomehypothetical protein4e-30129
NC_015567:313035:335706335706336041336Serratia sp. AS9 chromosome, complete genomehypothetical protein4e-30129
NC_009832:4521585:455079545507954551124330Serratia proteamaculans 568, complete genomeplasmid conserved hypothetical protein RAQPRD8e-28122
NC_009832:358291:381523381523381855333Serratia proteamaculans 568, complete genomeplasmid conserved hypothetical protein RAQPRD1e-27121
NC_014029:331919:365919365919366248330Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-27121
NC_014228:3534378:353863435386343538963330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-25112
NC_013892:1483000:149300114930011493330330Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-24110
NC_013892:3278647:330470633047063305032327Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-24108
NC_014228:3391500:342778334277833428112330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-22105
NC_005126:1223042:125186012518601252135276Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1787.8
NC_009708:4182460:418974241897424190050309Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1685.5
NC_020181:3328844:335158333515833351894312Enterobacter aerogenes EA1509E, complete genomeFIG01045568: hypothetical protein2e-1374.7
NC_015422:1876102:189598418959841896349366Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-1374.3
NC_008825:2525380:255245025524502552797348Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-1373.9
NC_011662:1041725:104579810457981046163366Thauera sp. MZ1T, complete genomeplasmid conserved hypothetical protein RAQPRD4e-1373.6
NC_010170:1498253:153737015373701537753384Bordetella petrii, complete genomehypothetical protein2e-1270.9
NC_009138:1974935:202203020220302022410381Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide2e-1270.9
NC_008463:5313527:533224153322415332600360Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative candidate type III effector Hop protein7e-1269.3
NC_012691:2614603:266246426624642662841378Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-1168.6
NC_008344:49039:918229182292193372Nitrosomonas eutropha C91, complete genomehypothetical protein1e-1168.6
NC_003919:2639080:265462926546292655087459Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1168.2
NC_016830:3869572:391683139168313917163333Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein3e-1167.4
NC_009656:4527457:463650946365094636847339Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-1065.1
NC_004129:5373886:543045854304585430811354Pseudomonas fluorescens Pf-5, complete genomeconserved hypothetical protein TIGR016901e-1065.1
NC_013716:3512950:353799435379943538320327Citrobacter rodentium ICC168, complete genomehypothetical protein2e-1064.7
NC_018080:5091772:516156551615655161858294Pseudomonas aeruginosa DK2 chromosome, complete genometype III effector Hop protein2e-1064.3
NC_006513:1379735:144300314430031443371369Azoarcus sp. EbN1, complete genomehypothetical protein2e-1064.3
NC_011901:2983555:299367429936742994024351Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-1064.3
NC_004578:934867:938532938532938897366Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-1062.8
NC_012912:483390:508788508788509165378Dickeya zeae Ech1591, complete genomehypothetical protein2e-0961.2
NC_007005:1636875:163790716379071638269363Pseudomonas syringae pv. syringae B728a, complete genomePlasmid conserved hypothetical protein, RAQPRD3e-0960.8
NC_012560:3667177:368687836868783687234357Azotobacter vinelandii DJ, complete genomePlasmid hypothetical protein, RAQPRD7e-0959.3
NC_021150:3667176:368687736868773687233357Azotobacter vinelandii CA6, complete genomePlasmid hypothetical protein, RAQPRD7e-0959.3
NC_016818:3851542:387403138740313874291261Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-0651.6