Pre_GI: BLASTP Hits

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Query: NC_004547:611178:618090 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 618090, End: 618890, Length: 801

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:701005:740782740782741777996Pectobacterium wasabiae WPP163, complete genomehypothetical protein8e-1580.9
NC_016816:4129299:413177041317704132759990Pantoea ananatis LMG 5342, complete genomeputative type IV pilus protein, TraE7e-1477.8
NC_014121:489500:520505520505521494990Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1376.6
NC_010102:4557037:4575596457559645766121017Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1376.6
NC_010102:4557037:4563222456322245643671146Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1375.1
NC_009705:78000:8379483794849121119Yersinia pseudotuberculosis IP 31758 plasmid_153kb, completeputative conjugal transfer protein TraE2e-1170.1
NC_011745:3443371:344557434455743446395822Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-0755.8
NC_012880:3529017:355367935536793554011333Dickeya dadantii Ech703, complete genomehypothetical protein1e-0653.5