Pre_GI: BLASTP Hits

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Query: NC_004547:611178:614071 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 614071, End: 615465, Length: 1395

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1223042:1236988123698812381781191Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-25118
NC_009708:4182460:4202151420215142034281278Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeshufflon protein3e-24113
NC_004129:5373886:5408742540874254099531212Pseudomonas fluorescens Pf-5, complete genometype IV prepilin PilV, putative3e-21103
NC_012214:3502992:3507968350796835093801413Erwinia pyrifoliae Ep1/96, complete genometype IV prepilin2e-1687.4
NC_018080:5091772:5131282513128251326611380Pseudomonas aeruginosa DK2 chromosome, complete genometype IV pilus protein PilV2e-1481.3
NC_009656:4527457:4611877461187746132561380Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilus protein PilV7e-1479
NC_008463:5246954:5286291528629152876191329Pseudomonas aeruginosa UCBPP-PA14, complete genomeType IV B pilus protein1e-1378.6
NC_012751:1296877:1310861131086113122251365Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilV type IV pilus minor pilin subunit, shufflon protein3e-1376.6
NC_012751:942315:9483479483479496151269Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilV type IV pilus minor pilin subunit, shufflon protein8e-1168.9
NC_010682:1624985:1632361163236116336591299Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein6e-0962.8