Pre_GI: BLASTP Hits

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Query: NC_004547:590844:604237 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 604237, End: 605553, Length: 1317

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1223042:1227913122791312289741062Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-50199
NC_007005:1705406:1705406170540617065391134Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-33144
NC_014029:331919:358410358410359042633Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-33143
NC_009832:358291:373757373757374401645Serratia proteamaculans 568, complete genometype IV B pilus protein3e-32139
NC_016845:4539381:454404645440464544615570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV B pilus protein2e-31137
NC_015566:316340:328211328211328855645Serratia sp. AS12 chromosome, complete genometype IV B pilus protein4e-31136
NC_015567:313035:328376328376329020645Serratia sp. AS9 chromosome, complete genometype IV B pilus protein4e-31136
NC_004129:5373886:5399717539971754008621146Pseudomonas fluorescens Pf-5, complete genomepilL protein5e-31135
NC_008463:5246954:5277443527744352785671125Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus protein1e-28128
NC_018080:5091772:5122434512243451235551122Pseudomonas aeruginosa DK2 chromosome, complete genometype IV B pilus protein1e-28127
NC_009656:4527457:4603026460302646041501125Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein1e-28127
NC_013892:3278647:329832832983283298864537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein (fragment)3e-28126
NC_009512:3282500:331470433147043315219516Pseudomonas putida F1, complete genomehypothetical protein9e-27121
NC_014228:3391500:342119734211973421733537Xenorhabdus nematophila ATCC 19061, complete genomeputative pilL protein (fragment)4e-26119
NC_020181:3328844:334341233434123343876465Enterobacter aerogenes EA1509E, complete genomePilL5e-26119
NC_013716:3512950:354470735447073545138432Citrobacter rodentium ICC168, complete genome6e-26119
NC_014532:3555550:357098835709883571638651Halomonas elongata DSM 2581, complete genomeK02487 type IV pili sensor histidine kinase/response regulator7e-26119
NC_010170:1498253:153070915307091531308600Bordetella petrii, complete genomeputative secreted protein8e-26118
NC_013892:1483000:149830414983041498840537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein3e-25116
NC_016830:3869572:392775739277573928299543Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-24112
NC_008782:2326439:234708123470812347692612Acidovorax sp. JS42, complete genomehypothetical protein4e-24112
NC_009138:1974935:201019220101922010812621Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-24112
NC_010002:4544818:455769445576944558272579Delftia acidovorans SPH-1, complete genomeputative secreted protein1e-23111
NC_010170:4533416:453812745381274538705579Bordetella petrii, complete genomeputative lipoprotein1e-23111
NC_012912:483390:517914517914518483570Dickeya zeae Ech1591, complete genomeputative secreted protein6e-23108
NC_012691:2614603:265491526549152655478564Tolumonas auensis DSM 9187, complete genomehypothetical protein7e-23108
NC_011992:1234610:123873112387311239330600Acidovorax ebreus TPSY, complete genomeputative secreted protein8e-23108
NC_011662:1058794:106346710634671064039573Thauera sp. MZ1T, complete genomehypothetical protein1e-22107
NC_008825:2525380:254173025417302542311582Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-22106
NC_015379:2417312:245286824528682453395528Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative exported protein6e-21102
NC_012731:600518:618745618745619452708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative type IV pilus protein6e-21102
NC_006513:1379735:146161514616151462184570Azoarcus sp. EbN1, complete genomehypothetical protein3e-20100
NC_008752:558828:575379575379575948570Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilL protein1e-1894.7
NC_008344:49039:989569895699537582Nitrosomonas eutropha C91, complete genomehypothetical protein3e-1893.2
NC_015572:2186394:219623621962362196805570Methylomonas methanica MC09 chromosome, complete genomehypothetical protein4e-1479.7
NC_007484:667879:675757675757676251495Nitrosococcus oceani ATCC 19707, complete genomePilL protein8e-1272
NC_008739:41793:438064380644255450Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencePilL protein2e-1170.9