Pre_GI: BLASTP Hits

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Query: NC_004547:590844:603654 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 603654, End: 604091, Length: 438

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014718:630188:638434638434638886453Burkholderia rhizoxinica HKI 454 chromosome, complete genomehypothetical protein4e-46182
NC_014029:331919:357839357839358273435Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-45181
NC_014307:1855356:186111918611191861550432Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein9e-43171
NC_014722:193500:202199202199202639441Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein4e-41166
NC_018012:1076839:108934710893471089883537Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein2e-40164
NC_014722:771483:786436786436786882447Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein1e-35148
NC_013194:3724500:374726137472613747717457Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete3e-26117
NC_013194:634039:646988646988647428441Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeprotein of unknown function DUF293e-25114
NC_013960:979556:984553984553984993441Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function DUF293e-24110
NC_000911:1284552:129972912997291300166438Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-23107
NC_017039:1283732:129880112988011299238438Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-23107
NC_017052:1283720:129878912987891299226438Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-23107
NC_017277:1283477:129854612985461298983438Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-23107
NC_017277:1717637:171763717176371718080444Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-21102
NC_017052:1717836:171783617178361718279444Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-21102
NC_017039:1717848:171784817178481718291444Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-21102
NC_000911:1718820:171882017188201719263444Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-21102
NC_010475:420978:427990427990428412423Synechococcus sp. PCC 7002, complete genomehypothetical protein9e-1889
NC_000911:1957758:196162519616251961876252Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-1684
NC_017039:1957610:196065319606531960904252Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-1684
NC_017052:1957598:196064119606411960892252Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-1684
NC_017277:1957399:196044219604421960693252Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-1684
NC_017277:1283477:129044812904481290909462Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1271.6
NC_017052:1283720:129069112906911291152462Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-1271.6
NC_017039:1283732:129070312907031291164462Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-1271.6
NC_000911:1284552:129163112916311292092462Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1271.6
NC_010475:649177:657068657068657508441Synechococcus sp. PCC 7002, complete genomeProtein of unknown function PF017242e-1271.2
NC_011729:4073761:408770140877014088015315Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein4e-1270.1
NC_011729:1496848:150166115016611502119459Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein8e-1269.3
NC_017277:1283477:129103212910321291496465Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-0856.6
NC_017052:1283720:129127512912751291739465Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein5e-0856.6
NC_017039:1283732:129128712912871291751465Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein5e-0856.6
NC_000911:1284552:129221512922151292679465Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-0856.6
NC_017277:1283477:128929512892951289774480Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0652
NC_017052:1283720:128953812895381290017480Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-0652
NC_017039:1283732:128955012895501290029480Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-0652
NC_000911:1284552:129047812904781290957480Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0652