Pre_GI: BLASTP Hits

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Query: NC_004547:590844:602464 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 602464, End: 602955, Length: 492

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:305969:332394332394332858465Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-59226
NC_014228:3505320:352182335218233522287465Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-58225
NC_013892:3278647:329439232943923294856465Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-58225
NC_013892:1483000:150242115024211502885465Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-58225
NC_014228:3391500:341726334172633417727465Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-58225
NC_015567:313035:322003322003322470468Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-57221
NC_015566:316340:321838321838322305468Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-57221
NC_009832:358291:367237367237367704468Serratia proteamaculans 568, complete genomehypothetical protein1e-57221
NC_014029:331919:356718356718357185468Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-57219
NC_014306:4106569:412056641205664121009444Erwinia billingiae Eb661, complete genomehypothetical protein8e-50196
NC_010554:2872000:287301428730142873481468Proteus mirabilis HI4320, complete genomehypothetical protein2e-49194
NC_016845:4539381:454473945447394545191453Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-42171
NC_008782:2326439:236174123617412362292552Acidovorax sp. JS42, complete genomehypothetical protein6e-30129
NC_008825:2525380:253052825305282531079552Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-29128
NC_014532:3596097:361154136115413612128588Halomonas elongata DSM 2581, complete genomehypothetical protein4e-29127
NC_013716:3512950:354525935452593545675417Citrobacter rodentium ICC168, complete genomehypothetical protein6e-27119
NC_020181:3328844:334287533428753343291417Enterobacter aerogenes EA1509E, complete genomeFIG051360: Periplasmic protein TonB, links inner and outer membranes7e-27119
NC_015379:2417312:245399424539942454479486Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-25114
NC_007484:667879:672358672358672786429Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein4e-25113
NC_012731:600518:619970619970620413444Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-24112
NC_007005:1636875:165669816566981657270573Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-21100
NC_008782:1483155:149646714964671497384918Acidovorax sp. JS42, complete genomehypothetical protein4e-21100
NC_010170:1103224:111857611185761119493918Bordetella petrii, complete genomehypothetical protein2e-2097.8
NC_010688:2781624:282152228215222822451930Xanthomonas campestris pv. campestris, complete genomehypothetical protein4e-2097.1
NC_004129:5373886:541271754127175413166450Pseudomonas fluorescens Pf-5, complete genomehypothetical protein9e-2095.9
NC_016830:3869572:393012839301283930709582Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-1995.9
NC_009656:4527457:461591446159144616402489Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1994.7
NC_012691:2614603:264193526419352642849915Tolumonas auensis DSM 9187, complete genomehypothetical protein6e-1993.2
NC_010170:1498253:151987515198751520792918Bordetella petrii, complete genomehypothetical protein2e-1891.3
NC_013421:1780722:178949717894971790417921Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1891.3
NC_002488:1638946:167774116777411678643903Xylella fastidiosa 9a5c, complete genomehypothetical protein3e-1890.9
NC_009138:1974935:1996192199619219973461155Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-1890.9
NC_008463:5246954:529022752902275290766540Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-1890.5
NC_018080:5091772:513513351351335135612480Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-1890.1
NC_010002:4544818:454881445488144549728915Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1789.4
NC_010170:4533416:455858945585894559503915Bordetella petrii, complete genomehypothetical protein1e-1789.4
NC_009512:3282500:331237233123723312905534Pseudomonas putida F1, complete genomehypothetical protein2e-1787.8
NC_008344:49039:106587106587107501915Nitrosomonas eutropha C91, complete genomehypothetical protein2e-1787.8
NC_008752:585884:592133592133593056924Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-1582
NC_008752:2936933:295800229580022958730729Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-1374.7
NC_008702:2230396:223709622370962237575480Azoarcus sp. BH72, complete genomeconserved hypothetical protein9e-1372.8
NC_015554:4648919:466874846687484669221474Alteromonas sp. SN2 chromosome, complete genomehypothetical protein6e-1166.6
NC_018697:1343756:137530413753041375777474Cycloclasticus sp. P1 chromosome, complete genomehypothetical protein4e-1063.9
NC_012731:2261787:226844522684452268831387Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-0857.4
NC_007086:2477040:251275025127502513025276Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-0755.1