Pre_GI: BLASTP Hits

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Query: NC_004547:590844:598803 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 598803, End: 599600, Length: 798

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:305969:328945328945329700756Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-76283
NC_014228:3505320:351882535188253519550726Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-72272
NC_013892:3278647:329139432913943292119726Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-72271
NC_013892:1503162:150515815051581505883726Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-72271
NC_014228:3391500:341407334140733414798726Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-72270
NC_014029:331919:352680352680353423744Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-66252
NC_009832:358291:363199363199363942744Serratia proteamaculans 568, complete genomeDomain of unknown function DUF18451e-65249
NC_015566:316340:317799317799318542744Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein1e-64246
NC_015567:313035:317964317964318707744Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein1e-64246
NC_016845:4539381:454590845459084546630723Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-52204
NC_010102:4477836:450050645005064501228723Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-48192
NC_003198:4397074:441783844178384418617780Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-47188
NC_012125:4481808:450497845049784505754777Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-47188
NC_016832:4368948:438971543897154390491777Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-47188
NC_004631:4381724:440248844024884403267780Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-47187
NC_010554:2872000:287701328770132877717705Proteus mirabilis HI4320, complete genomehypothetical protein3e-45182
NC_015379:2417312:245907724590772459862786Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-31134
NC_013716:3512950:354671335467133547411699Citrobacter rodentium ICC168, complete genomehypothetical protein2e-30132
NC_015733:2658337:265833726583372659092756Pseudomonas putida S16 chromosome, complete genomehypothetical protein5e-30131
NC_009512:3282500:330707933070793307834756Pseudomonas putida F1, complete genomeDomain of unknown function DUF18452e-29129
NC_012660:2143376:214654721465472147302756Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-29128
NC_016830:3869572:393560039356003936355756Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein5e-29128
NC_010170:1324758:135757413575741358395822Bordetella petrii, complete genomehypothetical protein7e-29127
NC_013421:1780722:179981717998171800635819Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF18456e-29127
NC_008463:5246954:526502252650225265750729Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-28126
NC_009656:4527457:459115145911514592020870Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-28126
NC_010170:1498253:150039215003921501171780Bordetella petrii, complete genomehypothetical protein4e-28125
NC_010170:1103224:110243311024331103227795Bordetella petrii, complete genomeputative transposon4e-28125
NC_012691:2614603:262793826279382628726789Tolumonas auensis DSM 9187, complete genomeDomain of unknown function DUF18454e-28125
NC_007086:2477040:248037624803762481131756Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein6e-28124
NC_010688:2781624:280464828046482805403756Xanthomonas campestris pv. campestris, complete genomehypothetical protein6e-28124
NC_018080:5091772:511150951115095112237729Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-27123
NC_009138:1974935:198907719890771989856780Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-27122
NC_008344:49039:116022116022116822801Nitrosomonas eutropha C91, complete genomehypothetical protein3e-27122
NC_008752:585884:608648608648609481834Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-26119
NC_007005:1705406:171397217139721714751780Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-24112
NC_020181:3328844:334125733412573341826570Enterobacter aerogenes EA1509E, complete genomeFIG141694: hypothetical protein in PFGI-1-like cluster7e-24110
NC_004129:5373886:539032153903215391052732Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-23109
NC_002488:1638946:169790816979081698657750Xylella fastidiosa 9a5c, complete genomehypothetical protein4e-23108
NC_010519:1963256:198759619875961988354759Haemophilus somnus 2336 chromosome, complete genomehypothetical protein7e-1994.4
NC_014532:3555550:356008735600873560911825Halomonas elongata DSM 2581, complete genomehypothetical protein2e-1790.1
NC_007484:667879:669914669914670657744Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-1685.9
NC_012913:1041969:104714210471421047909768Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein7e-1684.3
NC_008739:41793:454214542146230810Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencehypothetical protein3e-1582.4
NC_012731:600518:623751623751624362612Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-0859.3