Pre_GI: BLASTP Hits

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Query: NC_004547:590844:597237 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 597237, End: 598433, Length: 1197

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:3391500:3412393341239334136041212Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-120432
NC_013892:3278647:3289715328971532909381224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein6e-120431
NC_013892:1503162:1506339150633915075621224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-119429
NC_014228:3505320:3517133351713335183561224Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-118425
NC_014029:331919:3510313510313523021272Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-116417
NC_015566:316340:3163403163403176111272Serratia sp. AS12 chromosome, complete genomehypothetical protein4e-115414
NC_015567:313035:3165053165053177761272Serratia sp. AS9 chromosome, complete genomehypothetical protein4e-115414
NC_009832:358291:3617403617403630111272Serratia proteamaculans 568, complete genomehypothetical protein4e-115414
NC_009832:4564752:4564752456475245659991248Serratia proteamaculans 568, complete genomehypothetical protein3e-114411
NC_012779:305969:3265393265393277591221Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-110399
NC_009708:4215500:4215620421562042168191200Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-106385
NC_010102:4477836:4498932449893245001641233Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-102370
NC_014121:398012:4223464223464235841239Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-94347
NC_016845:4539381:4552667455266745538841218Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-94346
NC_010554:2872000:2878804287880428800991296Proteus mirabilis HI4320, complete genomehypothetical protein3e-84312
NC_004631:4381724:4400559440055944019021344Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-78291
NC_003198:4397074:4415909441590944172521344Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-78291
NC_012125:4481808:4503046450304645043891344Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-78291
NC_016832:4368948:4387783438778343891261344Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-78291
NC_020181:3328844:3332222333222233333551134Enterobacter aerogenes EA1509E, complete genomeFIG141751: hypothetical protein in PFGI-1-like cluster7e-50198
NC_013716:3512950:3551516355151635527211206Citrobacter rodentium ICC168, complete genomehypothetical protein1e-46187
NC_004129:5373886:5388485538848553897651281Pseudomonas fluorescens Pf-5, complete genomehypothetical protein5e-32139
NC_007005:1705406:1715223171522317165961374Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-31136
NC_015379:2417312:2460021246002124611661146Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-31135
NC_008463:5246954:5262925526292552642501326Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-31135
NC_009656:4527457:4588475458847545898061332Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein9e-31134
NC_016830:3869572:3936500393650039376871188Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-30133
NC_014532:3555550:3558095355809535594171323Halomonas elongata DSM 2581, complete genomehypothetical protein7e-30131
NC_012660:2143376:2147510214751021487001191Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-29130
NC_009648:5119271:513817451381745139046873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-28126
NC_012731:600518:624522624522625394873Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-28126
NC_010170:1324758:1355781135578113569711191Bordetella petrii, complete genomehypothetical protein1e-27124
NC_002488:1638946:1698842169884217000981257Xylella fastidiosa 9a5c, complete genomehypothetical protein2e-27123
NC_007086:2477040:2481453248145324826791227Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-27123
NC_010688:2781624:2803100280310028043261227Xanthomonas campestris pv. campestris, complete genomehypothetical protein4e-27122
NC_009138:1974935:1987495198749519887451251Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-26120
NC_010170:1498253:1498817149881715000611245Bordetella petrii, complete genomehypothetical protein5e-26119
NC_008344:49039:1170521170521182271176Nitrosomonas eutropha C91, complete genomehypothetical protein4e-25115
NC_012691:2614603:2626374262637426275791206Tolumonas auensis DSM 9187, complete genomehypothetical protein8e-25115
NC_008782:1510000:1510000151000015112351236Acidovorax sp. JS42, complete genomehypothetical protein2e-24113
NC_015733:2658337:2659418265941826606111194Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-23110
NC_013421:1780722:1800916180091618021301215Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-23108
NC_007484:667879:6684716684716697301260Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein5e-23108
NC_010519:1963256:1988533198853319897231191Haemophilus somnus 2336 chromosome, complete genomehypothetical protein9e-22104
NC_009512:3282500:3305710330571033069271218Pseudomonas putida F1, complete genomehypothetical protein7e-2098.6
NC_008752:585884:6098056098056110401236Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-1998.2
NC_002927:960369:9825059825059836891185Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-0963.2