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Query: NC_004547:590844:596810 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 596810, End: 597064, Length: 255

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:3278647:328936232893623289619258Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-24112
NC_013892:1503162:150765815076581507915258Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-24112
NC_014228:3391500:341204634120463412303258Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-24112
NC_014228:3505320:351678035167803517037258Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-24108
NC_015567:313035:316127316127316390264Serratia sp. AS9 chromosome, complete genomehypothetical protein1e-1892
NC_009832:358291:361362361362361625264Serratia proteamaculans 568, complete genomehypothetical protein1e-1892
NC_010102:4477836:449862044986204498853234Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0962
NC_012125:4481808:450278045027804503049270Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0961.6
NC_016832:4368948:438753843875384387786249Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-0961.2
NC_009708:4215500:421705542170554217216162Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-0960.5
NC_014121:398012:422037422037422267231Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein7e-0959.3
NC_010554:2872000:288022628802262880510285Proteus mirabilis HI4320, complete genomehypothetical protein2e-0858.2
NC_009832:4564752:456613445661344566238105Serratia proteamaculans 568, complete genomehypothetical protein2e-0754.7