Pre_GI: BLASTP Hits

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Query: NC_004547:590844:594162 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 594162, End: 595886, Length: 1725

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014029:331919:3475603475603492871728Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-113409
NC_015567:313035:3130353130353147801746Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-112406
NC_010102:4477836:4495244449524444969591716Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-112404
NC_014228:3391500:3409780340978034113631584Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-111404
NC_009832:358291:3582913582913600271737Serratia proteamaculans 568, complete genomehypothetical protein1e-111404
NC_013892:3278647:3287102328710232886791578Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-111402
NC_012125:4481808:4499177449917745009761800Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-111402
NC_003198:4397074:4412040441204044138391800Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-111402
NC_004631:4381724:4396690439669043984891800Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-111402
NC_016832:4368948:4383914438391443857131800Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-111402
NC_013892:1503162:1508598150859815101751578Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein6e-111401
NC_012779:305969:3229303229303245131584Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-110400
NC_016816:4232680:4234344423434442360561713Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-106387
NC_009708:4215500:4217863421786342195091647Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-106385
NC_014121:398012:4186644186644203701707Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-103377
NC_009832:4564752:4567747456774745694921746Serratia proteamaculans 568, complete genomehypothetical protein6e-102372
NC_014228:3505320:3514724351472435160971374Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-89328
NC_016845:4539381:4554468455446845560901623Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-87323
NC_010554:2872000:2881615288161528832641650Proteus mirabilis HI4320, complete genomehypothetical protein1e-81304
NC_009656:4527457:4585968458596845876951728Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-63244
NC_008344:49039:1188071188071204501644Nitrosomonas eutropha C91, complete genomehypothetical protein2e-62240
NC_008782:1510000:1511814151181415134691656Acidovorax sp. JS42, complete genomehypothetical protein2e-61237
NC_007086:2477040:2483259248325924849021644Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-61236
NC_009138:1974935:1985251198525119869151665Herminiimonas arsenicoxydans, complete genomehypothetical protein7e-61235
NC_020181:3328844:3330196333019633316801485Enterobacter aerogenes EA1509E, complete genomeProtein with ParB-like nuclease domain in PFGI-1-like cluster1e-60234
NC_010688:2781624:2800877280087728025201644Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-60233
NC_015379:2417312:2461743246174324632931551Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-60233
NC_013421:1780722:1802702180270218044261725Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-59231
NC_008463:5246954:5260394526039452621331740Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-59230
NC_018080:5091772:5107082510708251088181737Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-59229
NC_010170:4463000:4463373446337344650101638Bordetella petrii, complete genomehypothetical protein1e-58227
NC_010170:1324758:1353482135348213552061725Bordetella petrii, complete genomehypothetical protein2e-58227
NC_012691:2614603:2624066262406626258021737Tolumonas auensis DSM 9187, complete genomehypothetical protein9e-58224
NC_004129:5373886:5386147538614753878201674Pseudomonas fluorescens Pf-5, complete genomehypothetical protein5e-56219
NC_007005:1705406:1717367171736717191271761Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-55217
NC_012913:1041969:1043269104326910450111743Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein7e-54212
NC_010519:1963256:1990432199043219920781647Haemophilus somnus 2336 chromosome, complete genomehypothetical protein1e-51204
NC_012660:2143376:2149242214924221508281587Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-50201
NC_016830:3869572:3938229393822939398001572Pseudomonas fluorescens F113 chromosome, complete genomeprotein with ParB-like nuclease domain in PFGI-1-like cluster6e-50199
NC_009512:3282500:3303610330361033051481539Pseudomonas putida F1, complete genomehypothetical protein1e-48194
NC_015733:2658337:2661173266117326626391467Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-48194
NC_014532:3555550:3555550355555035574631914Halomonas elongata DSM 2581, complete genomehypothetical protein5e-45182
NC_012731:600518:6259256259256271991275Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-42171
NC_009648:5119271:5139577513957751408601284Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein7e-41169
NC_007484:667879:6663606663606678921533Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein3e-37156
NC_009792:3225965:324276232427623243397636Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-31136
NC_008789:707916:719387719387720382996Halorhodospira halophila SL1, complete genomehypothetical protein5e-30132
NC_016616:2768053:2771681277168127736211941Dechlorosoma suillum PS chromosome, complete genomehypothetical protein1e-20101
NC_008752:2936933:2944187294418729458961710Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-1998.2
NC_011035:829945:8369718369718384611491Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeParB family partitioning protein3e-1893.6
NC_009792:4017510:402513140251314025352222Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0654.7