Pre_GI: BLASTP Hits

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Query: NC_004547:590844:590844 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 590844, End: 591731, Length: 888

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4397074:4409652440965244106861035Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-124443
NC_004631:4381724:4394302439430243953361035Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-124443
NC_016832:4368948:438161043816104382560951Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Chromosome partitioning protein1e-123442
NC_012125:4481808:449687344968734497823951Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-123442
NC_010554:2872000:288535228853522886224873Proteus mirabilis HI4320, complete genomechromosome partitioning related protein3e-113408
NC_009832:4564752:457084745708474571773927Serratia proteamaculans 568, complete genomehypothetical protein4e-111401
NC_014228:3391500:340714334071433408030888Xenorhabdus nematophila ATCC 19061, complete genomeputative chromosome partitioning related protein SOJ-like protein2e-110399
NC_014228:3505320:351187835118783512765888Xenorhabdus nematophila ATCC 19061, complete genomeputative Protein-tyrosine kinase2e-110399
NC_013892:1503162:151191215119121512799888Xenorhabdus bovienii SS-2004 chromosome, complete genomechromosome partitioning-like protein5e-109394
NC_013892:3278647:328447732844773285364888Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-108392
NC_014029:331919:345342345342346205864Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-107386
NC_009708:4215500:422089242208924221773882Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-104377
NC_016845:4539381:455783045578304558702873Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,chromosome partitioning ATPase2e-103375
NC_009801:3374501:339642433964243397308885Escherichia coli E24377A, complete genomechromosome partitioning protein homolog3e-102371
NC_012779:305969:319470319470320342873Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-101366
NC_014121:398012:416426416426417310885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-98357
NC_010102:4477836:449296944929694493883915Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-97356
NC_016816:4232680:423741042374104238297888Pantoea ananatis LMG 5342, complete genomehypothetical protein8e-92337
NC_018080:5091772:509785950978595098752894Pseudomonas aeruginosa DK2 chromosome, complete genomechromosome partitioning-like protein1e-52206
NC_007005:1705406:172317317231731724033861Pseudomonas syringae pv. syringae B728a, complete genomechromosome partitioning related protein4e-52205
NC_008463:5246954:525158052515805252446867Pseudomonas aeruginosa UCBPP-PA14, complete genomechromosome partitioning related protein9e-52203
NC_009656:4527457:457389545738954574755861Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-51201
NC_012691:2614603:262296626229662623829864Tolumonas auensis DSM 9187, complete genomeCobyrinic acid ac-diamide synthase3e-50199
NC_012660:2143376:215113821511382151980843Pseudomonas fluorescens SBW25 chromosome, complete genomeputative chromosome partitioning-like protein1e-48193
NC_010170:1324758:135238513523851353248864Bordetella petrii, complete genomehypothetical protein1e-48193
NC_008344:49039:120705120705121565861Nitrosomonas eutropha C91, complete genomeCobyrinic acid a,c-diamide synthase2e-47189
NC_013716:3512950:355645335564533557337885Citrobacter rodentium ICC168, complete genomeputative partitioning protein A4e-47188
NC_008782:1510000:151369415136941514569876Acidovorax sp. JS42, complete genomeCobyrinic acid a,c-diamide synthase2e-46186
NC_010688:2781624:279976527997652800640876Xanthomonas campestris pv. campestris, complete genomechromosome partitioning related protein4e-46185
NC_015733:2658337:266283626628362663723888Pseudomonas putida S16 chromosome, complete genomecobyrinic acid a,c-diamide synthase5e-46184
NC_009512:3282500:330271733027173303595879Pseudomonas putida F1, complete genomeCobyrinic acid a,c-diamide synthase8e-46184
NC_007086:2477040:248513924851392486014876Xanthomonas campestris pv. campestris str. 8004, complete genomechromosome partitioning related protein2e-45182
NC_013421:1780722:180466318046631805526864Pectobacterium wasabiae WPP163, complete genomeCobyrinic acid ac-diamide synthase1e-44180
NC_009138:1974935:198413919841391985014876Herminiimonas arsenicoxydans, complete genomePutative chromosome partitioning related protein9e-44177
NC_016513:1126263:114148011414801142256777Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeParA-DnaB6e-40164
NC_008789:707916:720419720419721240822Halorhodospira halophila SL1, complete genomeCobyrinic acid a,c-diamide synthase5e-34144
NC_011035:829945:836087836087836974888Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein ParA9e-31134
NC_010170:4463000:446524744652474465990744Bordetella petrii, complete genomehypothetical protein4e-27122
NC_016616:2768053:277375027737502774658909Dechlorosoma suillum PS chromosome, complete genomechromosome partitioning ATPase5e-24112
NC_010939:1986263:200253720025372003046510Actinobacillus pleuropneumoniae serovar 7 str. AP76, completechromosome partitioning ATPase2e-23110
NC_008752:2936933:294328929432892944173885Acidovorax avenae subsp. citrulli AAC00-1, complete genomeCobyrinic acid a,c-diamide synthase2e-23109
NC_008532:973510:991371991371992111741Streptococcus thermophilus LMD-9, complete genomeTyrosine-protein kinase (capsular polysaccharide biosynthesis)4e-1065.5
NC_015275:911999:921658921658922443786Clostridium lentocellum DSM 5427 chromosome, complete genomeCobyrinic acid ac-diamide synthase1e-0964.3
NC_012914:469117:473754473754474446693Paenibacillus sp. JDR-2, complete genomecapsular exopolysaccharide family1e-0860.8
NC_009092:1599526:159875115987511599542792Shewanella loihica PV-4, complete genomeCobyrinic acid a,c-diamide synthase1e-0860.8
NC_010999:2155714:217165121716512172409759Lactobacillus casei, complete genomeWze4e-0858.9
NC_012108:2874831:2917503291750329196862184Desulfobacterium autotrophicum HRM2, complete genomeGumC24e-0858.9
NC_020995:1205524:121055412105541211210657Enterococcus casseliflavus EC20, complete genomecapsular exopolysaccharide family protein5e-0858.9
NC_006448:957830:978630978630979370741Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide exporter accessory protein8e-0858.2
NC_021175:1973880:199066919906691991367699Streptococcus oligofermentans AS 1.3089, complete genomeputative autophosphorylating protein tyrosine kinase9e-0857.8
NC_015573:2063925:208658820865882087295708Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomecapsular exopolysaccharide family1e-0757.4
NC_020207:843822:845574845574846272699Enterococcus faecium NRRL B-2354, complete genomeTyrosine-protein kinase EpsD1e-0757
NC_016751:1227495:1255218125521812573772160Marinitoga piezophila KA3 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein2e-0756.6
NC_014479:3510972:352591635259163526632717Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeprotein tyrosine kinase2e-0756.2
NC_016584:5388500:538979653897965390500705Desulfosporosinus orientis DSM 765 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein4e-0755.8
NC_013204:1135397:114124411412441142011768Eggerthella lenta DSM 2243, complete genomeCobyrinic acid ac-diamide synthase3e-0755.8
NC_014721:2534403:254725025472502548026777Caldicellulosiruptor kristjanssonii 177R1B chromosome, completecapsular exopolysaccharide family3e-0755.8
NC_015510:1012195:101313910131391013945807Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeCobyrinic acid ac-diamide synthase3e-0755.8
NC_015420:35384:498954989550650756Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completecapsular exopolysaccharide family4e-0755.5
NC_014219:3254268:328766932876693288385717Bacillus selenitireducens MLS10 chromosome, complete genomecapsular exopolysaccharide family5e-0755.5
NC_019940:2931500:2943788294378829460762289Thioflavicoccus mobilis 8321 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein5e-0755.5
NC_014169:1442435:144243514424351443274840Bifidobacterium longum subsp. longum JDM301 chromosome, completecobyrinic acid a,c-diamide synthase7e-0754.7
NC_011026:2533017:2542142254214225445322391Chloroherpeton thalassium ATCC 35110, complete genomecapsular exopolysaccharide family8e-0754.7
NC_016027:2047954:210607021060702106891822Gluconacetobacter xylinus NBRC 3288, complete genomechromosome partitioning protein ParA/MRP/soj1e-0653.9
NC_010184:3464707:346470734647073465369663Bacillus weihenstephanensis KBAB4, complete genomecapsular exopolysaccharide family1e-0653.9
NC_012988:2455807:2499521249952125006751155Methylobacterium extorquens DM4, complete genomereplication protein A1e-0653.9
NC_014733:1857020:189247218924721893353882Methylovorus sp. MP688 chromosome, complete genomechain length determinant protein tyrosine kinase epsg2e-0653.5
NC_011026:3009500:3027576302757630299722397Chloroherpeton thalassium ATCC 35110, complete genomecapsular exopolysaccharide family2e-0653.5
NC_008148:583030:5878275878275893051479Rubrobacter xylanophilus DSM 9941, complete genomeProtein-tyrosine kinase2e-0653.5
NC_017068:1788235:181386718138671814595729Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative capsular polysaccharide biosynthesis protein2e-0653.1
NC_014206:3468500:349048934904893491187699Geobacillus sp. C56-T3 chromosome, complete genomecapsular exopolysaccharide family3e-0653.1
NC_015634:359500:363517363517364212696Bacillus coagulans 2-6 chromosome, complete genomecapsular exopolysaccharide family3e-0652.8
NC_014377:480158:504298504298505014717Thermosediminibacter oceani DSM 16646 chromosome, complete genomecapsular exopolysaccharide family3e-0652.8
NC_016935:8716704:873013187301318730889759Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0652.4
NC_015690:8645500:865490286549028655660759Paenibacillus mucilaginosus KNP414 chromosome, complete genomeSoj3e-0652.4
NC_005296:3783348:3795678379567837980262349Rhodopseudomonas palustris CGA009, complete genomeputative exopolysaccharide polymerization protein5e-0652
NC_013729:5497814:5518180551818055192471068Kribbella flavida DSM 17836, complete genomeCobyrinic acid ac-diamide synthase5e-0652
NC_011004:4045277:4057608405760840599562349Rhodopseudomonas palustris TIE-1, complete genomecapsular exopolysaccharide family5e-0652
NC_009767:433432:439138439138439938801Roseiflexus castenholzii DSM 13941, complete genomeCobyrinic acid ac-diamide synthase5e-0652
NC_021171:4519495:453397745339774534681705Bacillus sp. 1NLA3E, complete genomecapsular exopolysaccharide family protein6e-0651.6
NC_013501:1300182:1302944130294413053162373Rhodothermus marinus DSM 4252, complete genomecapsular exopolysaccharide family6e-0651.6
NC_017051:58000:651796517965946768Rickettsia prowazekii str. Dachau chromosome, complete genomeSoj family protein6e-0651.6
NC_017049:58000:651776517765944768Rickettsia prowazekii str. Chernikova chromosome, complete genomeSoj family protein6e-0651.6
NC_013198:2088780:210582721058272106582756Lactobacillus rhamnosus GG, complete genomecapsular exopolysaccharide family protein (Wze)6e-0651.6
NC_021182:2160580:217550421755042176307804Clostridium pasteurianum BC1, complete genomeseptum site-determining protein MinD6e-0651.6
NC_009654:3849774:386363438636343864407774Marinomonas sp. MWYL1, complete genomecobyrinic acid ac-diamide synthase1e-0550.8