Pre_GI: BLASTP Hits

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Query: NC_004547:442927:480919 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 480919, End: 481917, Length: 999

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:2913966:292835829283582929356999Bacteroides fragilis 638R, complete genomehypothetical protein5e-47188
NC_003228:2929006:294337829433782944376999Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-47188
NC_006347:2861498:286976528697652870763999Bacteroides fragilis YCH46, complete genomehypothetical protein5e-47188
NC_010943:1426885:1453487145348714545001014Stenotrophomonas maltophilia K279a, complete genomeputative HlyD family secretion protein1e-40167
NC_015947:1290614:1309566130956613105791014Burkholderia sp. JV3 chromosome, complete genomesecretion protein HlyD family protein2e-38159
NC_017249:3406570:3421878342187834229391062Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-34147
NC_020829:4390417:439398043939804394951972Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-34145
NC_014107:171170:179761179761180705945Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,hypothetical protein2e-29130
NC_009253:3317533:3321619332161933226801062Desulfotomaculum reducens MI-1 chromosome, complete genomesecretion protein HlyD family protein4e-1892.4
NC_015172:2986867:3026377302637730273961020Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesecretion protein HlyD family protein9e-1581.3
NC_014614:478578:4976074976074986891083Clostridium sticklandii, complete genomeputative Secretion protein HlyD family protein precursor4e-1375.9
NC_010723:2231834:2251741225174122527991059Clostridium botulinum E3 str. Alaska E43, complete genomeputative secretion protein HlyD family protein1e-1274.7
NC_014655:2747399:274947727494772750427951Leadbetterella byssophila DSM 17132 chromosome, complete genomebiotin/lipoyl attachment domaiN-containing protein2e-1273.6
NC_016510:4343:553155316484954Flavobacterium columnare ATCC 49512 chromosome, complete genomehemolysin D7e-1065.1
NC_013520:1559000:1563659156365915647051047Veillonella parvula DSM 2008, complete genomesecretion protein HlyD family protein1e-0963.9
NC_012691:2614603:2690955269095526920341080Tolumonas auensis DSM 9187, complete genomesecretion protein HlyD family protein1e-0963.9
NC_009633:337706:3505363505363516901155Alkaliphilus metalliredigens QYMF chromosome, complete genomeRND family efflux transporter MFP subunit2e-0860.5
NC_016629:415711:4324784324784335301053Desulfovibrio africanus str. Walvis Bay chromosome, completesecretion protein HlyD family protein2e-0860.5
NC_008313:2629281:2629281262928126303301050Ralstonia eutropha H16 chromosome 1, complete sequencemultidrug resistance efflux pump9e-0858.2
NC_013960:2761353:278221127822112783191981Nitrosococcus halophilus Nc4 chromosome, complete genomesecretion protein HlyD family protein1e-0757.8
NC_017098:1149145:1151963115196311529971035Spirochaeta africana DSM 8902 chromosome, complete genomemultidrug resistance efflux pump1e-0757.8
NC_009454:1577319:158027115802711581248978Pelotomaculum thermopropionicum SI, complete genomemembrane-fusion protein4e-0755.8
NC_018697:618832:6262226262226273251104Cycloclasticus sp. P1 chromosome, complete genomeHlyD-family secretion protein, yhiI-like protein5e-0755.8
NC_010655:1606901:1647982164798216490041023Akkermansia muciniphila ATCC BAA-835, complete genomesecretion protein HlyD family protein6e-0652