Pre_GI: BLASTP Hits

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Query: NC_004547:442927:451996 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 451996, End: 452394, Length: 399

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:3933715:395498439549843955373390Photorhabdus asymbiotica, complete genomehypothetical protein9e-34141
NC_016641:2618587:261913926191392619489351Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-0960.8
NC_010674:311378:312361312361312720360Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein1e-0755.1
NC_014228:1336466:134062713406271340980354Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0755.1