Pre_GI: BLASTP Hits

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Query: NC_004547:3817656:3822091 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3822091, End: 3822462, Length: 372

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015660:487506:4912474912474925421296Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein4e-23106
NC_016816:1852659:1864699186469918691534455Pantoea ananatis LMG 5342, complete genomeRHS Repeat family protein2e-1787.8
NC_016610:2605922:2612167261216726135611395Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein1e-1375.1
NC_014041:3229867:3250910325091032573356426Zunongwangia profunda SM-A87 chromosome, complete genomeprotein containing RHS Repeat6e-1166.2
NC_003212:57061:6451964519662521734Listeria innocua Clip11262, complete genomehypothetical protein2e-1064.3
NC_012470:1606000:161596416159641616335372Streptococcus equi subsp. zooepidemicus, complete genomehypothetical protein2e-1064.3
NC_016114:3275004:328938332893833290069687Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein4e-0960.1
NC_012781:535674:5397385397385415341797Eubacterium rectale ATCC 33656, complete genomehypothetical protein8e-0959.3
NC_009511:4882047:489873748987374899711975Sphingomonas wittichii RW1 chromosome, complete genomehypothetical protein1e-0755.1
NC_011134:1360122:1377991137799113791661176Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehypothetical protein2e-0651.2