Pre_GI: BLASTP Hits

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Query: NC_004547:2470978:2490745 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2490745, End: 2491368, Length: 624

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:2613137:261462526146252615248624Pectobacterium wasabiae WPP163, complete genomeouter membrane lipoprotein LolB5e-84310
NC_014500:2479814:248241324824132483033621Dickeya dadantii 3937 chromosome, complete genomechaperone for lipoproteins6e-59226
NC_020064:2697116:270143527014352702058624Serratia marcescens FGI94, complete genomeouter membrane lipoprotein LolB7e-55213
NC_013716:1918664:191866419186641919287624Citrobacter rodentium ICC168, complete genomeouter-membrane lipoprotein6e-53206
NC_004631:1182883:118288311828831183506624Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane lipoprotein LolB precursor5e-51200
NC_003198:1771432:179762617976261798249624Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane lipoprotein LolB precursor5e-51200
NC_014121:1589389:161637116163711616982612Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane lipoprotein LolB1e-50199
NC_016514:2713834:271316027131602713837678Enterobacter cloacae EcWSU1 chromosome, complete genomeouter-membrane lipoprotein lolB4e-50197
NC_015663:3586836:360816636081663608780615Enterobacter aerogenes KCTC 2190 chromosome, complete genomeouter membrane lipoprotein LolB5e-49193
NC_012214:2221702:222107922210792221705627Erwinia pyrifoliae Ep1/96, complete genomeouter membrane lipoprotein LolB1e-48192
NC_013971:1660144:170731717073171707943627Erwinia amylovora ATCC 49946 chromosome, complete genomeouter membrane lipoprotein6e-48190
NC_013961:1622616:166979016697901670416627Erwinia amylovora, complete genomeOuter-membrane lipoprotein lolB precursor6e-48190
NC_021066:839734:871403871403872014612Raoultella ornithinolytica B6, complete genomeouter membrane lipoprotein LolB9e-48189
NC_016816:2684336:268581026858102686433624Pantoea ananatis LMG 5342, complete genomeouter-membrane lipoprotein HemM precursor2e-47188
NC_013508:1491945:151471315147131515333621Edwardsiella tarda EIB202, complete genomeouter membrane lipoprotein4e-45181
NC_015731:3658956:365895636589563659660705Nitrosomonas sp. Is79A3 chromosome, complete genomeOuter-membrane lipoprotein lolB4e-0651.6