Pre_GI: BLASTP Hits

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Query: NC_004547:2470978:2473501 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2473501, End: 2473887, Length: 387

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
UCMB5137:3660165:368381936838193684199381Bacillus atrophaeus UCMB-5137YyaH1e-22105
NC_016048:184500:194165194165194572408Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-22103
NC_014639:3584000:360530136053013605681381Bacillus atrophaeus 1942 chromosome, complete genomeYyaH protein5e-22103
CP002207:3584000:360530136053013605681381Bacillus atrophaeus 1942, complete genomeYyaH5e-22103
NC_013192:171000:193547193547193933387Leptotrichia buccalis DSM 1135, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase3e-21100
NC_014976:2175667:219277721927772193157381Bacillus subtilis BSn5 chromosome, complete genomeputative lyase3e-21100
NC_020244:4020315:404214640421464042550405Bacillus subtilis XF-1, complete genomeputative lyase5e-2199.8
NC_019896:17873:188641886419244381Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein5e-2199.8
NC_009725:3878862:389819538981953898575381Bacillus amyloliquefaciens FZB42, complete genomeYyaH9e-2199
NC_019842:3921424:394096139409613941341381Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein9e-2199
NC_020410:3868573:388989638898963890276381Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative lyase2e-2097.8
NC_017191:3901914:391883439188343919214381Bacillus amyloliquefaciens XH7 chromosome, complete genomelyase1e-1995.1
NC_017188:3900951:391714239171423917522381Bacillus amyloliquefaciens TA208 chromosome, complete genomelyase1e-1995.1
NC_014387:3227875:324457232445723244955384Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglyoxalase family protein2e-1890.9
NC_015311:2626850:265792526579252658308384Prevotella denticola F0289 chromosome, complete genomeglyoxalase family protein4e-1889.7
NC_014933:901897:922453922453922842390Bacteroides helcogenes P 36-108 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase8e-1889
NC_015873:2197412:220928322092832209666384Megasphaera elsdenii DSM 20460, complete genomelactoylglutathione lyase and related lyases3e-1684
NC_015977:2718437:272384227238422724063222Roseburia hominis A2-183 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase4e-0753.5