Pre_GI: BLASTP Hits

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Query: NC_004547:1970686:1981773 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1981773, End: 1982474, Length: 702

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2921932:293384429338442934545702Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeWbqC-like family protein1e-122439
NC_014121:1357339:138242913824291383127699Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeWbqC-like family protein7e-74276
NC_008060:3155133:315513331551333155885753Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein2e-66251
NC_007512:865500:880460880460881158699Pelodictyon luteolum DSM 273, complete genomehypothetical protein2e-56218
NC_007651:3656433:365993436599343660644711Burkholderia thailandensis E264 chromosome I, complete sequenceWbnG1e-38159
NC_006138:23902:423134231343002690Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-38159
NC_015968:2845751:284802028480202848724705Enterobacter asburiae LF7a chromosome, complete genomeWbqC-like family protein2e-37155
NC_012881:4023895:403166240316624032366705Desulfovibrio salexigens DSM 2638, complete genomeWbqC-like family protein5e-33141
NC_004347:3303957:332274833227483323470723Shewanella oneidensis MR-1, complete genomehypothetical protein5e-32137
NC_009831:3612206:362618836261883626886699Shewanella sediminis HAW-EB3, complete genomehypothetical protein5e-25114
NC_002928:123126:136026136026136745720Bordetella parapertussis 12822, complete genomehypothetical protein4e-21101
NC_008228:3679949:369075736907573691467711Pseudoalteromonas atlantica T6c, complete genomehypothetical protein2e-1892.8
NC_013204:799857:816866816866817588723Eggerthella lenta DSM 2243, complete genomeWbqC-like family protein2e-1789.4
NC_017068:2436960:248642424864242487182759Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-1789
NC_008510:1339926:136124013612401361923684Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,hypothetical protein1e-1687
NC_008508:1382036:140335914033591404042684Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,hypothetical protein1e-1687
NC_016112:3103716:313679131367913137528738Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein2e-1685.9
NC_018645:4104302:412778641277864128493708Desulfobacula toluolica Tol2, complete genomehypothetical protein2e-1685.9
NC_007796:3379614:339371933937193394414696Methanospirillum hungatei JF-1, complete genomehypothetical protein1e-1479.7
NC_007954:1494291:151403615140361514761726Shewanella denitrificans OS217, complete genomehypothetical protein2e-1479.3
NC_020418:603750:620210620210620920711Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1479
NC_009719:3532587:354513735451373545835699Parvibaculum lavamentivorans DS-1 chromosome, complete genomeWbqC-like family protein9e-1373.9
NC_016604:297687:319654319654320478825Mycobacterium rhodesiae NBB3 chromosome, complete genomeWbqC-like protein2e-1169.3
NC_012491:5628000:564535056453505646036687Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-1168.9
NC_008380:855246:871887871887872579693Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein2e-1066.2
NC_018643:1037456:104583010458301046516687Alpha proteobacterium HIMB5 chromosome, complete genomeWbqC-like protein2e-1066.2
NC_008702:2942246:295588229558822956574693Azoarcus sp. BH72, complete genomeconserved hypothetical protein4e-1065.1
NC_002755:1684161:169688316968831697578696Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-0860.5
NC_000962:1684005:169672716967271697422696Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-0860.5
NC_009525:1685522:169824416982441698939696Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-0860.5
NC_015848:1708176:172090217209021721597696Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-0860.5
NC_012943:2707677:271604427160442716739696Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-0860.5
NC_016768:2704350:271271727127172713412696Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-0860.5
NC_017026:1686500:169774916977491698444696Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-0860.5
NC_019950:1689910:170148717014871702182696Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein1e-0860.5
NC_009565:1688642:170136417013641702059696Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-0860.5