Pre_GI: BLASTP Hits

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Query: NC_004547:1873390:1895384 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1895384, End: 1896118, Length: 735

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1987291:201329020132902014024735Salmonella enterica subsp. enterica serovar Agona str. SL483,putative DNA-binding protein3e-105380
NC_011601:2139188:215145521514552152189735Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein4e-104377
NC_016831:947281:962635962635963369735Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative DNA-binding protein2e-103375
NC_011294:2053991:208008720800872080821735Salmonella enterica subsp. enterica serovar Enteritidis strDNA-binding protein2e-103375
NC_011205:2180598:220710522071052207839735Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA-binding protein2e-103375
NC_011274:2044000:207115220711522071949798Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein3e-103374
NC_013716:2139952:215974221597422160410669Citrobacter rodentium ICC168, complete genomeputative DNA-binding protein3e-23108
NC_012214:1650523:166840316684031668852450Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein4e-2098.2
NC_010067:892729:922509922509923210702Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1271.6
NC_011094:2791719:281194728119472812510564Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-1271.2
NC_009801:2898426:293020829302082930771564Escherichia coli E24377A, complete genomehypothetical protein4e-1168.6