Pre_GI: BLASTP Hits

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Query: NC_004547:1873390:1890477 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1890477, End: 1890773, Length: 297

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:892729:924639924639924929291Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-26117
NC_011745:2209288:226429622642962264586291Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-1890.1
NC_013421:1696746:170295917029591703132174Pectobacterium wasabiae WPP163, complete genomehypothetical protein7e-1785.9
NC_016832:948029:959145959145959438294Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1064.3