Pre_GI: BLASTP Hits

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Query: NC_004547:1837500:1855523 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1855523, End: 1856875, Length: 1353

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:2898426:293600929360092936974966Escherichia coli E24377A, complete genomehypothetical protein7e-170597
NC_015594:214500:2214942214942229031410Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completehypothetical protein1e-84314
NC_007908:1108494:1141525114152511429671443Rhodoferax ferrireducens T118, complete genomehypothetical protein2e-81303
NC_006396:2025500:2041665204166520434581794Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein7e-73275
NC_015556:819503:8271268271268286821557Pseudomonas fulva 12-X chromosome, complete genomephage protein7e-34145
NC_008542:483761:4995464995465011621617Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage protein1e-32141
NC_008060:2913671:2924028292402829256441617Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage protein1e-32141
NC_018868:2458122:2466786246678624683631578Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomephage protein8e-31135
NC_007323:81837:8183781837834621626Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, completehypothetical protein3e-30133
NC_008800:1090000:1108807110880711103331527Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-22106
NC_017986:4790482:4826717482671748282131497Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-21103
NC_020063:2565605:2584689258468925862961608Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-1480.5
NC_010163:614634:636201636201636956756Acholeplasma laidlawii PG-8A chromosome, complete genomeSir2-domain-containing protein4e-1273.2
NC_013739:2106662:212315321231532124025873Conexibacter woesei DSM 14684, complete genomehypothetical protein9e-0858.5
NC_012491:3736167:3766116376611637695353420Brevibacillus brevis NBRC 100599, complete genomehypothetical protein2e-0757.4
NC_018678:554675:5701955701955715501356Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein3e-0757
NC_016613:2139276:2145052214505221463561305Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein5e-0756.2
NC_009464:2687445:2696711269671126986181908Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein3e-0653.5
NC_015674:1114915:1122144112214411244952352Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein4e-0653.1
NC_020207:1614000:1622902162290216240831182Enterococcus faecium NRRL B-2354, complete genomehypothetical protein4e-0653.1
NC_013316:81969:8249082490838661377Clostridium difficile R20291, complete genomehypothetical protein8e-0652