Pre_GI: BLASTP Hits

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Query: NC_004547:1837500:1853836 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1853836, End: 1854879, Length: 1044

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012225:1497934:1510698151069815117351038Brachyspira hyodysenteriae WA1, complete genomehypothetical protein9e-39160
NC_011080:2870428:2879530287953028806451116Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein4e-27122
NC_012917:3684840:3693835369383536949501116Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-25117
NC_010102:2862178:2869904286990428710611158Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-21102
NC_010801:238430:2481422481422493381197Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein7e-21101
NC_011663:2813033:2820851282085128220501200Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-2099.8
NC_008577:2402165:2427014242701424281471134Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-1894.4
NC_012691:2476223:2488000248800024891481149Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-1789.7
NC_010999:1381497:139123113912311392163933Lactobacillus casei, complete genomePutative uncharacterized protein FNV21924e-1169.3
NC_004578:4869673:487864148786414879582942Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1067.4
NC_010125:955863:9773909773909786611272Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein3e-1066.6
NC_009050:212270:2387132387132400411329Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein8e-1065.1
NC_015573:569625:5994965994966010431548Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein8e-1065.1
NC_008786:3845988:3857369385736938586491281Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein1e-0964.3
NC_013171:342714:3964053964053976611257Anaerococcus prevotii DSM 20548, complete genomehypothetical protein3e-0963.2
NC_012912:4167429:4183041418304141842041164Dickeya zeae Ech1591, complete genomehypothetical protein5e-0962.4
NC_009720:5046861:5056659505665950580501392Xanthobacter autotrophicus Py2, complete genomehypothetical protein7e-0962
NC_009719:1135523:1144595114459511459741380Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein1e-0861.2
NC_013205:1275012:1289401128940112905011101Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,hypothetical protein2e-0860.5
NC_009708:4182460:4193378419337841946161239Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-0860.5
NC_015177:1950461:1952587195258719539241338Pedobacter saltans DSM 12145 chromosome, complete genomehypothetical protein5e-0858.9
NC_012997:817553:8295858295858307571173Teredinibacter turnerae T7901, complete genomehypothetical protein1e-0757.8
NC_013421:478586:4869794869794881571179Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-0755.8
NC_006513:1379735:1446732144673214481201389Azoarcus sp. EbN1, complete genomehypothetical protein9e-0754.7
NC_015635:4097711:4121747412174741230751329Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-0653.9
NC_011071:1877500:1886682188668218878691188Stenotrophomonas maltophilia R551-3, complete genomehypothetical protein8e-0651.6