Pre_GI: BLASTP Hits

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Query: NC_004547:1837500:1851097 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1851097, End: 1851453, Length: 357

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020418:2868000:287468728746872875043357Morganella morganii subsp. morganii KT, complete genomeHypothetical protein8e-29125
NC_003295:2787371:279776127977612798117357Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-26117
NC_010278:860165:876908876908877675768Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein2e-25114
NC_009053:895965:913424913424914191768Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-25114
NC_006322:2173500:217703721770372177390354Bacillus licheniformis ATCC 14580, complete genomeYyaQ1e-24111
NC_006270:2172693:217619121761912176544354Bacillus licheniformis ATCC 14580, complete genomeconserved protein YyaQ1e-24111
NC_014976:2175667:218250721825072182863357Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein4e-23106
NC_000964:4164683:418511641851164185472357Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-22105
NC_020244:4020315:402779440277944028150357Bacillus subtilis XF-1, complete genomehypothetical protein3e-22103
NC_013592:2338403:234957323495732349917345Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF4194e-22103
NC_012912:2426520:244098124409812441325345Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF4194e-21100
NC_014833:3161257:317754531775453177964420Ruminococcus albus 7 chromosome, complete genomehypothetical protein2e-2097.8
NC_009802:1659257:167405616740561674409354Campylobacter concisus 13826, complete genome30S ribosomal protein S86e-1992.8
NC_015975:923812:944755944755945114360Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein6e-1992.8
NC_014363:1396912:141341714134171413776360Olsenella uli DSM 7084 chromosome, complete genomeprotein of unknown function DUF4191e-1891.7
NC_010610:2013659:201883320188332019189357Lactobacillus fermentum IFO 3956, complete genomehypothetical protein5e-1889.7
NC_013508:1862896:186929418692941869998705Edwardsiella tarda EIB202, complete genomehypothetical protein4e-1786.7
NC_016630:1890917:189334918933491894035687Filifactor alocis ATCC 35896 chromosome, complete genomeMmcQ protein2e-1581.3
NC_014727:1071773:107333610733361074004669Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein4e-1580.1
NC_021175:751616:770777770777771448672Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein1e-1168.6
NC_014622:724000:727947727947728294348Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein3e-0753.9
NC_011026:2624775:263840726384072638760354Chloroherpeton thalassium ATCC 35110, complete genomeprotein of unknown function DUF4191e-0652
NC_015977:189101:208136208136208462327Roseburia hominis A2-183 chromosome, complete genomemethylated-DNA-(protein)-cysteine S-methyltransferase3e-0650.4
NC_016047:2658000:269015326901532690485333Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeMmcQ protein4e-0650.1
NC_012526:2317862:233088323308832331239357Deinococcus deserti VCD115, complete genomehypothetical protein5e-0650.1