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Query: NC_004547:1837500:1847045 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1847045, End: 1847386, Length: 342

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014355:3669470:366947036694703669889420Candidatus Nitrospira defluvii, complete genomehypothetical protein6e-1166.2
NC_009455:1025915:105242810524281052763336Dehalococcoides sp. BAV1 chromosome, complete genomeTfoX domain-containing protein2e-0960.8
NC_009075:937782:939871939871940239369Burkholderia pseudomallei 668 chromosome II, complete sequenceTfoX domain protein2e-0754.3
NC_007435:2701242:270334627033462703714369Burkholderia pseudomallei 1710b chromosome II, complete sequenceTfoX, N-terminal3e-0753.9
NC_009078:862796:864885864885865253369Burkholderia pseudomallei 1106a chromosome II, complete sequenceTfoX domain protein3e-0753.9
NC_009079:1492664:150592215059221506290369Burkholderia mallei NCTC 10247 chromosome I, complete sequenceTfoX domain protein3e-0753.9
NC_006351:881655:883744883744884112369Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-0753.9