Pre_GI: BLASTP Hits

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Query: NC_004547:1837500:1842241 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1842241, End: 1847037, Length: 4797

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015683:732668:7463117463117513205010Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein01174
NC_002935:781172:7993437993438041574815Corynebacterium diphtheriae NCTC 13129, complete genomePutative ATP-dependent helicase01168
NC_012590:850130:8675268675268724694944Corynebacterium aurimucosum ATCC 700975, complete genomeputative ATP-dependent DNA helicase01153
NC_013169:1845735:1845735184573518507174983Kytococcus sedentarius DSM 20547, complete genomeATP dependent helicase, Lhr family01047
NC_007164:511171:5318585318585368524995Corynebacterium jeikeium K411, complete genomeputative ATP-dependent DNA helicase01027
NC_008536:3601841:3602640360264036072054566Solibacter usitatus Ellin6076, complete genomeDEAD/H associated domain protein0995
NC_011891:2088134:2088134208813420927444611Anaeromyxobacter dehalogenans 2CP-1, complete genomeDEAD/H associated domain protein0985
NC_015673:397947:4194264194264243844959Corynebacterium resistens DSM 45100 chromosome, complete genomeATP-dependent DNA helicase0954
NC_012803:361127:3561023561023611305029Micrococcus luteus NCTC 2665, complete genome0768
NC_021184:2936244:2936244293624429407404497Desulfotomaculum gibsoniae DSM 7213, complete genomeLhr-like helicase2e-156554
NC_008391:404388:4208294208294253554527Burkholderia cepacia AMMD chromosome 2, complete sequenceDEAD/H associated domain protein1e-140502
NC_010001:902506:9154059154059195504146Clostridium phytofermentans ISDg, complete genomeDEAD/DEAH box helicase domain protein4e-140500
NC_007508:2941889:2959960295996029643544395Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeATP-dependent DNA helicase Lhr1e-138495
NC_011891:4450031:4476352447635244806114260Anaeromyxobacter dehalogenans 2CP-1, complete genomeDEAD/H associated domain protein3e-116421
NC_009515:474285:4742854742854768852601Methanobrevibacter smithii ATCC 35061, complete genomeATP-dependent helicase3e-95351
NC_000854:1342983:1354540135454013572452706Aeropyrum pernix K1, complete genomeputative ATP-dependent helicase9e-91336
NC_016070:719791:7365697365697393162748Thermoproteus tenax Kra 1, complete genomeATP-dependent helicase4e-67257
NC_003295:2787371:280332628033262804081756Ralstonia solanacearum GMI1000, complete genomehypothetical protein7e-64247
NC_010525:1314999:1335599133559913384122814Thermoproteus neutrophilus V24Sta, complete genomeDEAD/DEAH box helicase domain protein1e-62243
NC_019942:1211535:1211535121153512142072673Aciduliprofundum sp. MAR08-339, complete genomeLhr-like helicase2e-62242
NC_015151:1427965:1488726148872614915662841Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeDEAD/DEAH box helicase7e-59230
NC_007955:742834:7620857620857649192835Methanococcoides burtonii DSM 6242, complete genomeDEAD/DEAH box helicase-like protein1e-57226
NC_013926:1166454:1168343116834311710152673Aciduliprofundum boonei T469 chromosome, complete genomeDEAD/DEAH box helicase domain protein3e-57225
NC_014537:603564:6331606331606360602901Vulcanisaeta distributa DSM 14429 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein7e-57223
NC_019792:3219333:3239661323966132425012841Natronobacterium gregoryi SP2 chromosome, complete genomeLhr-like helicase1e-56223
NC_012883:1283529:1301281130128113040312751Thermococcus sibiricus MM 739, complete genomeLarge helicase-related protein3e-56221
NC_010525:1177154:1192683119268311954212739Thermoproteus neutrophilus V24Sta, complete genomeDEAD/DEAH box helicase domain protein3e-55218
NC_006624:873525:8879228879228906992778Thermococcus kodakarensis KOD1, complete genomelarge helicase-related protein4e-54214
NC_014507:982000:9821929821929848792688Methanoplanus petrolearius DSM 11571 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein9e-54213
NC_000868:757823:7769427769427796802739Pyrococcus abyssi GE5, complete genomelarge helicase-related protein1e-53213
NC_009776:157311:1651041651041679352832Ignicoccus hospitalis KIN4/I, complete genomeDEAD/DEAH box helicase domain protein2e-52209
NC_017954:301562:3015623015623043512790Thermogladius cellulolyticus 1633 chromosome, complete genomeDEAD/DEAH box helicase2e-52208
NC_007513:987969:1002947100294710054212475Synechococcus sp. CC9902, complete genomeDEAD/DEAH box helicase-like6e-51204
NC_008319:1306482:1316964131696413194142451Synechococcus sp. CC9311, complete genomeATP-dependent helicase, DEAD/DEAH box family protein3e-49198
NC_015723:1998363:1998363199836320010502688Cupriavidus necator N-1 chromosome 2, complete sequenceDNA ligase Lig2e-48195
NC_008095:7499255:7518954751895475215362583Myxococcus xanthus DK 1622, complete genomeATP-dependent helicase, DEAD/DEAH box family3e-48194
NC_013741:1390823:1408399140839914125114113Archaeoglobus profundus DSM 5631, complete genometranscriptional regulator, XRE family1e-45186
NC_015562:1230532:1246389124638912505134125Methanotorris igneus Kol 5 chromosome, complete genomeDEAD/H associated domain-containing protein2e-45186
NC_017275:1189162:1214566121456612173612796Sulfolobus islandicus HVE10/4 chromosome, complete genomeDEAD/DEAH box helicase6e-45184
NC_014160:801618:8016188016188044252808Thermosphaera aggregans DSM 11486 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein8e-42173
NC_014408:682689:6826896826896848212133Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent helicase7e-37157
NC_014148:3959960:3979304397930439814242121Planctomyces limnophilus DSM 3776 chromosome, complete genomeDEAD/DEAH box helicase domain protein6e-36154
NC_013194:3861409:3869550386955038716852136Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeDEAD/DEAH box helicase domain protein1e-34150
NC_016887:1949927:1974963197496319770952133Nocardia cyriacigeorgica GUH-2, complete genomeputative ATP-dependent helicase2e-33146
NC_011891:1278199:1298935129893513010402106Anaeromyxobacter dehalogenans 2CP-1, complete genomeDEAD/DEAH box helicase domain protein1e-33146
NC_007333:810381:8285118285118306462136Thermobifida fusca YX, complete genomehelicase, C-terminal:DEAD/DEAH box helicase, N-terminal1e-33146
NC_010572:1872840:1898715189871519008532139Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP-dependent helicase4e-33145
NC_013510:1703464:1711029171102917131132085Thermomonospora curvata DSM 43183, complete genomeDEAD/DEAH box helicase domain protein7e-33144
NC_008757:151862:1707931707931728202028Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeDEAD/DEAH box helicase domain protein1e-31140
NC_007645:3581114:3587257358725735893562100Hahella chejuensis KCTC 2396, complete genomeLhr-like helicase2e-31139
NC_009434:3611738:3745515374551537477342220Pseudomonas stutzeri A1501, complete genomeATP-dependent helicase5e-31137
NC_009439:3770282:3781365378136537835812217Pseudomonas mendocina ymp, complete genomeDEAD/DEAH box helicase domain-containing protein7e-31137
NC_009142:5698100:5714083571408357163772295Saccharopolyspora erythraea NRRL 2338, complete genomeputative ATP-dependent helicase7e-31137
NC_008463:2467219:2489403248940324916132211Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative helicase1e-30136
NC_013159:502928:5287135287135308212109Saccharomonospora viridis DSM 43017, complete genomeLhr-like helicase3e-29132
NC_013440:811780:8131298131298159062778Haliangium ochraceum DSM 14365, complete genome3'-5' exonuclease1e-28130
NC_014910:1200605:1216539121653912187432205Alicycliphilus denitrificans BC chromosome, complete genomedead/deah box helicase domain protein2e-28129
NC_013440:1624561:1625910162591016286872778Haliangium ochraceum DSM 14365, complete genome3'-5' exonuclease3e-28129
NC_003888:7337453:7374208737420873764032196Streptomyces coelicolor A3(2), complete genomeATP-dependent helicase1e-27126
NC_017047:2042346:2051482205148220536802199Rahnella aquatilis HX2 chromosome, complete genomeDEAD/DEAH box helicase2e-26122
NC_007907:761486:7848037848037869652163Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-26121
NC_014217:2020737:2030412203041220326552244Starkeya novella DSM 506 chromosome, complete genomeDEAD/DEAH box helicase domain protein4e-26121
NC_009338:3359500:3386977338697733890672091Mycobacterium gilvum PYR-GCK chromosome, complete genomeDEAD/DEAH box helicase4e-26121
NC_009656:4527457:4563274456327445654962223Pseudomonas aeruginosa PA7 chromosome, complete genomeDEAD/DEAH box helicase7e-26120
NC_007333:39579:7194471944741542211Thermobifida fusca YX, complete genomehelicase, C-terminal:DEAD/DEAH box helicase, N-terminal8e-26120
NC_017075:1869326:1869326186932618715332208Rubrivivax gelatinosus IL144, complete genomeputative ATP-dependent helicase8e-26120
NC_010002:5691968:5700427570042757026492223Delftia acidovorans SPH-1, complete genomeDEAD/DEAH box helicase domain protein1e-25120
NC_007493:1929000:1939988193998819421592172Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceATP-dependent helicase1e-25119
NC_016010:1822212:1842738184273818446961959Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeLhr-like helicase2e-25119
NC_007952:3196085:3218882321888232211132232Burkholderia xenovorans LB400 chromosome 2, complete sequenceDEAD/DEAH box helicase4e-25118
NC_008639:2545107:2552272255227225544042133Chlorobium phaeobacteroides DSM 266, complete genomeDEAD/DEAH box helicase domain protein4e-25118
NC_013440:1580802:1580802158080215829372136Haliangium ochraceum DSM 14365, complete genomeDEAD/DEAH box helicase domain protein1e-24116
NC_008435:2658986:2690170269017026924222253Rhodopseudomonas palustris BisA53, complete genomeDEAD/DEAH box helicase domain protein2e-24115
NC_015172:850802:8538618538618560262166Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeDEAD/DEAH box helicase domain protein3e-24115
NC_012918:1444333:1456652145665214588832232Geobacter sp. M21 chromosome, complete genomeDEAD/DEAH box helicase1e-23113
NC_016612:28451:4061740617428152199Klebsiella oxytoca KCTC 1686 chromosome, complete genomeATP-dependent helicase2e-23112
NC_015580:1584078:1597259159725915994332175Novosphingobium sp. PP1Y, complete genomeATP-dependent helicase Lhr and Lhr-like helicase2e-23112
NC_006370:1810842:1829710182971018319082199Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical ATP-dependent helicase7e-21104
NC_019942:1078837:1096394109639410979771584Aciduliprofundum sp. MAR08-339, complete genomeLhr-like helicase2e-1585.9
NC_013967:1590500:1614465161446516168162352Haloferax volcanii DS2 chromosome, complete genomeATP-dependent helicase1e-1484
NC_013158:2303000:2319032231903223214012370Halorhabdus utahensis DSM 12940, complete genomeDEAD/DEAH box helicase domain protein5e-1481.3
NC_015680:663341:6893096893096914472139Pyrococcus yayanosii CH1 chromosome, complete genomeski2-like helicase8e-1480.9
NC_017096:779550:8001418001418023812241Caldisericum exile AZM16c01, complete genomeputative ATP-dependent helicase1e-1380.1
NC_000868:834872:8474058474058495522148Pyrococcus abyssi GE5, complete genomeski2-like helicase2e-1379.3
NC_016147:3349272:3363478336347833660302553Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeDistinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster3e-1379
NC_017271:64293:6429364293667882496Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein4e-1378.6
NC_010688:69458:6945869458719772520Xanthomonas campestris pv. campestris, complete genomeputative ATP-dependent helicase5e-1378.2
NC_016010:65949:6594965949684442496Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeDistinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster5e-1378.2
NC_007508:64955:6641566415689102496Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative helicase1e-1277
NC_016948:419500:4369964369964393292334Mycobacterium intracellulare MOTT-64 chromosome, complete genomeATP-dependent rna helicase, dead/deah box family protein1e-1173.6
NC_007164:2261644:2283522228352222858762355Corynebacterium jeikeium K411, complete genomeputative helicase2e-1173.2
NC_003155:5616000:5629010562901056315172508Streptomyces avermitilis MA-4680, complete genomeATP-dependent RNA helicase2e-1172.4
NC_013169:2581500:2600567260056726029092343Kytococcus sedentarius DSM 20547, complete genomehelicase family protein with metal-binding cysteine cluster4e-1068.6
NC_019977:1897556:1897556189755619003602805Methanomethylovorans hollandica DSM 15978, complete genomehelicase family protein with metal-binding cysteine cluster8e-1067.4
NC_009523:2769154:2780213278021327829062694Roseiflexus sp. RS-1 chromosome, complete genomeDEAD/DEAH box helicase2e-0965.9
NC_014618:4114004:4160006416000641644424437Enterobacter cloacae SCF1 chromosome, complete genomehelicase domain-containing protein2e-0965.9
NC_015167:2663686:2678734267873426850396306Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein4e-0965.1
NC_003551:793046:7945607945607970162457Methanopyrus kandleri AV19, complete genomeArchaea-specific Superfamily II helicase1e-0863.5
NC_003106:5970:5970597088192850Sulfolobus tokodaii str. 7, complete genomehypothetical protein2e-0863.2
NC_007513:632884:6343206343206371002781Synechococcus sp. CC9902, complete genomeDEAD/DEAH box helicase-like3e-0862.4
NC_009434:3611738:3714917371491737212496333Pseudomonas stutzeri A1501, complete genomeputative helicase3e-0862
NC_008701:1039304:1040055104005510421752121Pyrobaculum islandicum DSM 4184, complete genomeDEAD/DEAH box helicase domain protein5e-0861.6
NC_015957:2755709:2755709275570927624676759Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein6e-0861.2
NC_015580:1584078:1587364158736415933215958Novosphingobium sp. PP1Y, complete genomehypothetical protein1e-0760.1
NC_006958:748500:7647077647077710096303Corynebacterium glutamicum ATCC 13032, complete genomehelicase2e-0760.1
NC_003450:747000:7632347632347695366303Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase2e-0760.1
NC_010572:3878660:3882876388287638852002325Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP-dependent RNA helicase2e-0760.1
NC_015576:612164:6263136263136325856273Mycobacterium sp. JDM601 chromosome, complete genomehelicase superfamily protein3e-0759.3
NC_015424:3520783:3537177353717735416164440Aeromonas veronii B565 chromosome, complete genomeputative DEAD/DEAH box helicase3e-0759.3
NC_012856:2815797:2822604282260428279165313Ralstonia pickettii 12D chromosome 1, complete genomeDEAD/DEAH box helicase domain protein2e-0759.3
NC_005070:617448:6174486174486201772730Synechococcus sp. WH 8102, complete genomeputative DNA helicase2e-0759.3
NC_015588:1213873:1235585123558512421186534Isoptericola variabilis 225 chromosome, complete genomeDEAD/DEAH box helicase domain protein2e-0759.3
NC_013757:3897413:3912101391210139184756375Geodermatophilus obscurus DSM 43160, complete genomeProtein of unknown function DUF19983e-0758.9
NC_013172:2877722:2901164290116429036652502Brachybacterium faecium DSM 4810, complete genomehelicase family protein with metal-binding cysteine cluster3e-0758.9
NC_005213:295994:356596356596357378783Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein5e-0758.2
NC_005213:202400:356596356596357378783Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein5e-0758.2
NC_016582:7101701:7119473711947371218452373Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative ATP-dependent RNA helicase8e-0757.8
NC_014410:937599:9471529471529519814830Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Protein of unknown function DUF19987e-0757.8
NC_007516:1847745:1863063186306318658372775Synechococcus sp. CC9605, complete genomeDEAD/DEAH box helicase-like7e-0757.8
NC_008740:1484531:1486170148617014928116642Marinobacter aquaeolei VT8, complete genomeDEAD/DEAH box helicase domain protein8e-0757.4
NC_004369:3082691:3082691308269130889936303Corynebacterium efficiens YS-314, complete genomehypothetical protein9e-0757.4
NC_012108:1664341:1672239167223916781245886Desulfobacterium autotrophicum HRM2, complete genomeDbp1e-0657
NC_000911:3478000:3493885349388534969053021Synechocystis sp. PCC 6803, complete genomeantiviral protein3e-0655.8
NC_017039:3474500:3490529349052934935493021Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeantiviral protein3e-0655.8
NC_017052:3474500:3490518349051834935383021Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeantiviral protein3e-0655.8
NC_017277:3475500:3491518349151834945383021Synechocystis sp. PCC 6803, complete genomeantiviral protein3e-0655.8
NC_010498:4930649:4930649493064949369906342Escherichia coli SMS-3-5, complete genomeDEAD/DEAH box helicase domain-containing protein2e-0655.8
NC_002695:5381576:5381576538157653879176342Escherichia coli O157:H7 str. Sakai, complete genomeputative RNA helicase4e-0655.5
NC_011353:5426793:5455224545522454615656342Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDEAD/DEAH box helicase4e-0655.5
NC_011353:5455224:5455224545522454615656342Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDEAD/DEAH box helicase4e-0655.5
NC_013008:5382917:5411285541128554176266342Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase4e-0655.5
NC_013008:5411285:5411285541128554176266342Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehelicase4e-0655.5
NC_013941:5192500:5219841521984152261826342Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDEAD/DEAH box helicase4e-0655.5
NC_013941:5219841:5219841521984152261826342Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDEAD/DEAH box helicase4e-0655.5
NC_016800:1243000:1243013124301312458052793Corynebacterium diphtheriae BH8 chromosome, complete genomeputative helicase5e-0655.1
NC_016801:1255611:1259677125967712624692793Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative helicase5e-0655.1
NC_016802:1212726:1213916121391612167082793Corynebacterium diphtheriae HC02 chromosome, complete genomeputative helicase5e-0655.1
NC_016785:1193471:1194661119466111974532793Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative helicase5e-0654.7
NC_016799:1268706:1269896126989612726882793Corynebacterium diphtheriae 31A chromosome, complete genomeputative helicase5e-0654.7
NC_016789:1257392:1258582125858212613742793Corynebacterium diphtheriae PW8 chromosome, complete genomeputative helicase5e-0654.7
NC_017186:9120711:9142580914258091472834704Amycolatopsis mediterranei S699 chromosome, complete genomeDEAD/DEAH box helicase7e-0654.7
NC_014318:9120651:9142520914252091472234704Amycolatopsis mediterranei U32 chromosome, complete genomeDEAD/DEAH box helicase7e-0654.7