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Query: NC_004547:1837500:1841727 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1841727, End: 1842110, Length: 384

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003295:2787371:279565427956542796046393Ralstonia solanacearum GMI1000, complete genomehypothetical protein6e-37152
NC_003295:2787371:279623227962322796618387Ralstonia solanacearum GMI1000, complete genomehypothetical protein5e-39159
NC_012522:2623172:262462826246282625059432Rhodococcus opacus B4, complete genomehypothetical protein1e-0962
NC_008061:2773670:562256226011390Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceLimonene-1,2-epoxide hydrolase2e-0651.2
NC_008726:925895:930168930168930596429Mycobacterium vanbaalenii PYR-1, complete genomeLimonene-1,2-epoxide hydrolase2e-0651.2
NC_010515:1900967:192137819213781921767390Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceLimonene-12-epoxide hydrolase2e-0651.2
NC_015594:489367:493558493558493959402Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeLimonene-12-epoxide hydrolase5e-0856.6