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Query: NC_004547:1837500:1837903 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1837903, End: 1839441, Length: 1539

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018679:2412000:2428463242846324300011539Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completedeoxyribodipyrimidine photolyase-like protein7e-144511
NC_015138:5046921:5049785504978550513651581Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completedeoxyribodipyrimidine photolyase-like protein6e-122437
NC_013446:2237854:2259741225974122613001560Comamonas testosteroni CNB-2, complete genomedeoxyribodipyrimidine photolyase-related protein7e-117421
NC_007604:1183497:1204598120459812061091512Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-113409
NC_006576:414696:4146964146964162071512Synechococcus elongatus PCC 6301, complete genomehypothetical protein4e-113408
NC_000911:1718820:1732809173280917343231515Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-107389
NC_017039:1717848:1731837173183717333511515Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-107389
NC_017052:1717836:1731825173182517333391515Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-107389
NC_017277:1717637:1731626173162617331401515Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-107389
NC_015424:2316228:2352158235215823536781521Aeromonas veronii B565 chromosome, complete genomeCryptochrome/photolyase1e-102374
NC_017079:1476887:1476887147688714784251539Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein2e-102373
NC_019977:1806500:1821854182185418233171464Methanomethylovorans hollandica DSM 15978, complete genomedeoxyribodipyrimidine photolyase-related protein2e-68260