Pre_GI: BLASTP Hits

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Query: NC_004547:164000:189183 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 189183, End: 190130, Length: 948

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:97436:116718116718117668951Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-113409
NC_016831:3875134:389691538969153897877963Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-111402
NC_011294:3782655:378170637817063782668963Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-111402
NC_011274:3894387:391616739161673917129963Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-111402
NC_016832:3900000:392206639220663923028963Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-111400
NC_003198:3924952:394777039477703948732963Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-111400
NC_004631:3910451:393326939332693934231963Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-111400
NC_010067:3846962:386741038674103868372963Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-110398
NC_011750:4307166:430622043062204307179960Escherichia coli IAI39 chromosome, complete genomeputative polysaccharide deacetylase2e-108392
NC_008253:3896704:389575838957583896717960Escherichia coli 536, complete genomehypothetical protein YibQ precursor2e-108392
NC_011601:4036590:403564440356444036603960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepolysaccharide deacetylase2e-108392
NC_011745:4226186:422524042252404226199960Escherichia coli ED1a chromosome, complete genomeputative polysaccharide deacetylase2e-108392
NC_011748:4167043:416609741660974167056960Escherichia coli 55989, complete genomeputative polysaccharide deacetylase2e-108392
CU928145:4167043:416609741660974167056960Escherichia coli 55989 chromosome, complete genomeputative polysaccharide deacetylase2e-108392
NC_011751:4251296:425035042503504251309960Escherichia coli UMN026 chromosome, complete genomeputative polysaccharide deacetylase2e-108392
NC_011742:3998285:399733939973393998298960Escherichia coli S88 chromosome, complete genomepolysaccharide deacetylase2e-108392
NC_007946:4050762:404981640498164050775960Escherichia coli UTI89, complete genomehypothetical protein YibQ precursor2e-108392
NC_004431:4223232:422228642222864223245960Escherichia coli CFT073, complete genomeHypothetical protein yibQ precursor2e-108392
NC_013353:4668181:468870646887064689665960Escherichia coli O103:H2 str. 12009, complete genomepolysaccharide deacetylase2e-108392
AP010958:4668181:468870646887064689665960Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted polysaccharide deacetylase2e-108392
CU928160:3862935:386198938619893862948960Escherichia coli IAI1 chromosome, complete genomeputative polysaccharide deacetylase3e-108391
NC_011741:3862935:386198938619893862948960Escherichia coli IAI1 chromosome, complete genomeputative polysaccharide deacetylase3e-108391
CP002185:3998112:399716639971663998125960Escherichia coli W, complete genomepredicted polysaccharide deacetylase3e-108391
NC_009800:3821824:382087838208783821837960Escherichia coli HS, complete genomepolysaccharide deacetylase family protein3e-108391
NC_010468:80000:9951999519100478960Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF610 YibQ3e-108391
CP002516:88500:107948107948108907960Escherichia coli KO11, complete genomeprotein of unknown function DUF610 YibQ3e-108391
NC_009801:4108179:410723341072334108192960Escherichia coli E24377A, complete genomepolysaccharide deacetylase family protein3e-108391
NC_011415:4040211:403926540392654040224960Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-108391
NC_012947:94930:114611114611115570960Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-108391
NC_012967:3729813:372886737288673729826960Escherichia coli B str. REL606 chromosome, complete genomeputative polysaccharide deacetylase3e-108391
NC_016902:88500:107948107948108907960Escherichia coli KO11FL chromosome, complete genomehypothetical protein3e-108391
NC_000913:3786124:378612437861243787083960Escherichia coli K12, complete genomepredicted polysaccharide deacetylase7e-108390
AC_000091:3827856:385135538513553852314960Escherichia coli W3110 DNA, complete genomepredicted polysaccharide deacetylase7e-108390
NC_010473:3883701:388370138837013884660960Escherichia coli str. K-12 substr. DH10B, complete genomepredicted polysaccharide deacetylase7e-108390
NC_012759:3675396:367445036744503675409960Escherichia coli BW2952 chromosome, complete genomeputative polysaccharide deacetylase7e-108390
NC_013361:4991020:501155750115575012516960Escherichia coli O26:H11 str. 11368 chromosome, complete genomepolysaccharide deacetylase1e-107389
NC_016822:4093000:411332341133234114282960Shigella sonnei 53G, complete genomeputative polysaccharide deacetylase2e-107389
NC_010658:3774110:377411037741103775069960Shigella boydii CDC 3083-94, complete genomepolysaccharide deacetylase family protein2e-107389
NC_013716:4408201:443081344308134431625813Citrobacter rodentium ICC168, complete genomeputative polysaccharide deacetylase1e-98359
NC_007712:3806000:382041638204163821369954Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-97356
NC_007384:3956465:397640339764033977236834Shigella sonnei Ss046, complete genomehypothetical protein5e-96351
NC_008563:4083558:408273840827384083571834Escherichia coli APEC O1, complete genomepredicted polysaccharide deacetylase3e-96351
NC_004337:3590323:376082337608233761656834Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-96350
NC_004741:3992384:401356140135614014394834Shigella flexneri 2a str. 2457T, complete genomehypothetical protein5e-96350
NC_007613:3637832:363701236370123637845834Shigella boydii Sb227, complete genomehypothetical protein3e-95348
NC_008258:3995553:401759240175924018416825Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-94346
NC_016816:127802:168070168070168981912Pantoea ananatis LMG 5342, complete genomepolysaccharide deacetylase family protein9e-94343
NC_013892:4129500:4152755415275541537621008Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein8e-77287
NC_020418:603750:6048676048676059401074Morganella morganii subsp. morganii KT, complete genomePutative divergent polysaccharide deacetylase2e-72272
NC_008577:44184:570605706057815756Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF610, YibQ3e-37155
NC_007517:2055305:206213520621352063097963Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF610, YibQ5e-34145
NC_007645:1336227:135955713595571360417861Hahella chejuensis KCTC 2396, complete genomehypothetical protein7e-34144
NC_014973:1336500:135460513546051355561957Geobacter sp. M18 chromosome, complete genomehypothetical protein1e-33144
NC_011146:1429836:144891814489181449871954Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF610 YibQ2e-33142
NC_002939:1926084:193204919320491932921873Geobacter sulfurreducens PCA, complete genomehypothetical protein3e-31135
NC_020304:2107979:212485321248532125803951Desulfocapsa sulfexigens DSM 10523, complete genomehypothetical protein2e-29129
NC_020409:512861:5410715410715422911221Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein4e-27122
NC_015565:287900:332541332541333350810Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein1e-26120
NC_002967:2507993:2527967252796725291391173Treponema denticola ATCC 35405, complete genomehypothetical protein3e-24112
NC_011420:69843:938129381294534723Rhodospirillum centenum SW, complete genomehypothetical protein3e-23109
NC_019978:2189394:2205900220590022070481149Halobacteroides halobius DSM 5150, complete genomehypothetical protein6e-22105
NC_008710:819389:819389819389820300912Borrelia turicatae 91E135, complete genomecation transport ATPases1e-20100
NC_014392:2311243:232888223288822329733852Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomehypothetical protein9e-1374.3
NC_014774:1210004:47747715411065Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completehypothetical protein8e-0651.6