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Query: NC_004547:164000:172396 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 172396, End: 173259, Length: 864

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:4790696:480651948065194807379861Pectobacterium wasabiae WPP163, complete genomeglycosyltransferase sugar-binding region containing DXD motif3e-127454
NC_014618:2423661:243545224354522436300849Enterobacter cloacae SCF1 chromosome, complete genomeglycosyltransferase family protein1e-73276
NC_009615:3490206:3494584349458434962181635Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein5e-1168.6
NC_009615:3818500:382115738211573821864708Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein1e-1067
NC_017270:220282:221562221562222344783Vibrio cholerae LMA3984-4 chromosome chromosome I, completeMannosyltransferase OCH18e-0857.8
NC_016445:2663837:266383726638372664619783Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completemannosyltransferase OCH1-like enzyme8e-0857.8
NC_016944:238580:238580238580239362783Vibrio cholerae IEC224 chromosome I, complete sequencemannosyltransferase OCH1-like enzyme8e-0857.8
NC_002505:238569:238569238569239357789Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein8e-0857.8
NC_009457:2764972:276497227649722765760789Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein8e-0857.8
NC_012578:224559:224559224559225347789Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein8e-0857.8
NC_012582:272320:272320272320273108789Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein8e-0857.8
NC_012668:368305:399629399629400417789Vibrio cholerae MJ-1236 chromosome 1, complete sequencemannosyltransferase OCH1-like enzyme8e-0857.8
NC_015633:413587:420378420378421160783Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-0654.3