Pre_GI: BLASTP Hits

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Query: NC_004547:164000:170891 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 170891, End: 172168, Length: 1278

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:4790696:4807609480760948088861278Pectobacterium wasabiae WPP163, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein0816
NC_013971:73037:1062171062171074911275Erwinia amylovora ATCC 49946 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0699
NC_013961:73037:1062171062171074911275Erwinia amylovora, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0699
NC_011283:105245:1256091256091268831275Klebsiella pneumoniae 342 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0679
NC_013850:109500:1308091308091320831275Klebsiella variicola At-22 chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein0679
NC_016816:127802:1498571498571511311275Pantoea ananatis LMG 5342, complete genome3-deoxy-D-manno-octulosonic-acid transferase0674
NC_020063:97436:98770987701000471278Enterobacteriaceae bacterium strain FGI 57, complete genome3-deoxy-D-manno-octulosonic-acid transferase0673
NC_009792:4658909:4673810467381046750871278Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0668
NC_011750:4307166:4323460432346043247371278Escherichia coli IAI39 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0667
NC_007606:3784847:3800809380080938020861278Shigella dysenteriae Sd197, complete genome3-deoxy-D-manno-octulosonic-acid transferase0667
NC_011205:3942500:3959039395903939603161278Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533-deoxy-D-manno-octulosonic-acid transferase0666
NC_016856:3916500:3933030393303039343071278Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S3-deoxy-D-manno-octulosonic-acid transferase0666
NC_016857:3924000:3940653394065339419301278Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/743-deoxy-D-manno-octulosonic-acid transferase0666
NC_016860:3925500:3942234394223439435111278Salmonella enterica subsp. enterica serovar Typhimurium str3-deoxy-D-manno-octulosonic-acid transferase0666
NC_016863:3864000:3880637388063738819141278Salmonella enterica subsp. enterica serovar Typhimurium str. UK-13-deoxy-D-manno-octulosonic-acid transferase0666
NC_017046:3923000:3939479393947939407561278Salmonella enterica subsp. enterica serovar Typhimurium str. 7983-deoxy-D-manno-octulosonic-acid transferase0666
NC_011080:3875320:3892489389248938937661278Salmonella enterica subsp. enterica serovar Newport str. SL254,3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011094:3778000:3795424379542437967011278Salmonella enterica subsp. enterica serovar Schwarzengrund str3-deoxy-D-manno-octulosonic-acid transferase0666
NC_002695:4537000:4552399455239945536761278Escherichia coli O157:H7 str. Sakai, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011083:3915500:3932348393234839336251278Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3-deoxy-D-manno-octulosonic-acid transferase0666
NC_003197:3902500:3919338391933839206151278Salmonella typhimurium LT2, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011748:4167043:4183562418356241848391278Escherichia coli 55989, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
CU928145:4167043:4183562418356241848391278Escherichia coli 55989 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0666
NC_007613:3637832:3654138365413836554151278Shigella boydii Sb227, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011745:4226186:4242704424270442439811278Escherichia coli ED1a chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_007946:4050762:4067068406706840683451278Escherichia coli UTI89, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO) transferase0666
NC_008563:4083558:4099864409986441011411278Escherichia coli APEC O1, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011742:3998285:4014591401459140158681278Escherichia coli S88 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_006905:3845000:3861639386163938629161278Salmonella enterica subsp. enterica serovar Choleraesuis str3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011149:3822000:3838705383870538399821278Salmonella enterica subsp. enterica serovar Agona str. SL483,3-deoxy-D-manno-octulosonic-acid transferase0666
NC_010468:80000:8195881958832351278Escherichia coli ATCC 8739, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein0666
CU928160:3862935:3879223387922338805001278Escherichia coli IAI1 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0666
NC_011601:4036590:4054910405491040561871278Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011741:3862935:3879223387922338805001278Escherichia coli IAI1 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_012759:3675396:3694889369488936961661278Escherichia coli BW2952 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_013008:4595043:4611544461154446128211278Escherichia coli O157:H7 str. TW14359 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_013353:4668181:4670923467092346722001278Escherichia coli O103:H2 str. 12009, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_013361:4991020:4993762499376249950391278Escherichia coli O26:H11 str. 11368 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_013364:4460500:4475941447594144772181278Escherichia coli O111:H- str. 11128, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_013941:4427000:4442344444234444436211278Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeKdo transferase WaaA0666
NC_016822:4093000:4094925409492540962021278Shigella sonnei 53G, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011415:4040211:4056730405673040580071278Escherichia coli SE11 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_011353:4639002:4655503465550346567801278Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_010473:3883701:3904140390414039054171278Escherichia coli str. K-12 substr. DH10B, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0666
AC_000091:3827856:3830598383059838318751278Escherichia coli W3110 DNA, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_007384:3956465:3958065395806539593421278Shigella sonnei Ss046, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0666
NC_004431:4223232:4239538423953842408151278Escherichia coli CFT073, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_000913:3786124:3806563380656338078401278Escherichia coli K12, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_009800:3821824:3838121383812138393981278Escherichia coli HS, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
AP010958:4668181:4670923467092346722001278Escherichia coli O103:H2 str. 12009 DNA, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_009801:4108179:4124476412447641257531278Escherichia coli E24377A, complete genome3-deoxy-D-manno-octulosonic-acid transferase0666
NC_008253:3896704:3913010391301039142871278Escherichia coli 536, complete genome3-deoxy-D-manno-octulosonic-acid transferase WaaA0666
NC_015761:3611993:3629165362916536304421278Salmonella bongori NCTC 12419, complete genome3-deoxy-D-manno-octulosonic-acid transferase0665
NC_011751:4251296:4267818426781842690951278Escherichia coli UMN026 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0665
NC_010498:4031500:4046561404656140478381278Escherichia coli SMS-3-5, complete genome3-deoxy-D-manno-octulosonic-acid transferase0665
NC_012947:94930:9626596265975421278Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete3-deoxy-D-manno-octulosonic-acid transferase0665
NC_012967:3729813:3746895374689537481721278Escherichia coli B str. REL606 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0665
NC_011740:4007000:4025251402525140265281278Escherichia fergusonii ATCC 35469, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0665
NC_012125:3840000:3856494385649438577711278Salmonella enterica subsp. enterica serovar Paratyphi C strain3-deoxy-D-manno-octulosonic-acid transferase0664
NC_013716:4408201:4411043441104344123201278Citrobacter rodentium ICC168, complete genome3-deoxy-D-manno-octulosonic-acid transferase0664
NC_010658:3774110:3791362379136237926391278Shigella boydii CDC 3083-94, complete genome3-deoxy-D-manno-octulosonic-acid transferase0664
NC_010067:3846962:3848548384854838498251278Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0663
NC_004337:3590323:3778854377885437801311278Shigella flexneri 2a str. 301, complete genome3-deoxy-D-manno-octulosonic-acid transferase0663
NC_004337:3761865:3778854377885437801311278Shigella flexneri 2a str. 301, complete genome3-deoxy-D-manno-octulosonic-acid transferase0663
NC_004741:3992384:3995126399512639964031278Shigella flexneri 2a str. 2457T, complete genome3-deoxy-D-manno-octulosonic-acid transferase0663
NC_008258:3995553:3998256399825639995331278Shigella flexneri 5 str. 8401, complete genome3-deoxy-D-manno-octulosonic-acid transferase0663
NC_002655:4606000:4621382462138246226591278Escherichia coli O157:H7 EDL933, complete genome3-deoxy-D-manno-octulosonic-acid transferase0663
CP002185:3998112:4014409401440940156861278Escherichia coli W, complete genome3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)0663
CP002516:88500:9038790387916641278Escherichia coli KO11, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein0663
NC_016902:88500:9038790387916641278Escherichia coli KO11FL chromosome, complete genomethree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein0663
NC_003198:3924952:3927682392768239289591278Salmonella enterica subsp. enterica serovar Typhi str. CT18,3-deoxy-D-manno-octulosonic-acid transferase0662
NC_004631:3910451:3913181391318139144581278Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3-deoxy-D-manno-octulosonic-acid transferase0662
NC_011147:3686500:3703674370367437049511278Salmonella enterica subsp. enterica serovar Paratyphi A str3-deoxy-D-manno-octulosonic-acid transferase0660
NC_006511:3690828:3707997370799737092741278Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3-deoxy-D-manno-octulosonic-acid transferase0660
NC_017328:3794105:3811054381105438123311278Shigella flexneri 2002017 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase0658
NC_010102:3851500:3868351386835138695621212Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0654
NC_011274:3894387:3897117389711738983281212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/913-deoxy-D-manno-octulosonic-acid transferase0654
NC_011294:3782655:3800508380050838017191212Salmonella enterica subsp. enterica serovar Enteritidis str3-deoxy-D-manno-octulosonic-acid transferase0654
NC_016810:3923988:3940718394071839419291212Salmonella enterica subsp. enterica serovar Typhimurium str3-deoxy-D-manno-octulosonic-acid transferase0654
NC_016831:3875134:3877864387786438790751212Salmonella enterica subsp. enterica serovar Gallinarum/pullorum3-deoxy-D-manno-octulosonic-acid transferase0652
NC_013508:63914:6391463914651881275Edwardsiella tarda EIB202, complete genome3-deoxy-D-manno-octulosonic-acid transferase0652
NC_016832:3900000:3901978390197839031891212Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,3-deoxy-D-manno-octulosonic-acid transferase0650
NC_004578:5623783:5650394565039456517371344Pseudomonas syringae pv. tomato str. DC3000, complete genome3-deoxy-D-manno-octulosonic-acid transferase3e-114412
NC_009052:71058:7184871848731131266Shewanella baltica OS155, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein2e-105383
NC_008321:4631866:4648662464866246499871326Shewanella sp. MR-4, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein3e-104379
NC_008577:4907497:4924296492429649256211326Shewanella sp. ANA-3 chromosome 1, complete sequenceCoproporphyrinogen oxidase3e-104379
NC_011901:491783:5120645120645133111248Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeThree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein4e-98358
NC_016745:675909:6860306860306872951266Oceanimonas sp. GK1 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase6e-98358
NC_009783:649500:6629776629776642421266Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-87324
NC_012578:224559:2232792232792245981320Vibrio cholerae M66-2 chromosome I, complete sequence3-deoxy-D-manno-octulosonic-acid transferase3e-86319
NC_002505:238569:2372892372892386081320Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete3-deoxy-D-manno-octulosonic-acid transferase3e-86319
NC_012668:368305:4004174004174016971281Vibrio cholerae MJ-1236 chromosome 1, complete sequence3-deoxy-D-manno-octulosonic-acid transferase3e-86319
NC_009457:2764972:2763692276369227650111320Vibrio cholerae O395 chromosome 2, complete sequence3-deoxy-D-manno-octulosonic-acid transferase2e-85316
NC_012582:272320:2710402710402723591320Vibrio cholerae O395 chromosome chromosome I, complete sequence3-deoxy-D-manno-octulosonic-acid transferase2e-85316
NC_010677:353839:3749153749153762101296Francisella tularensis subsp. mediasiatica FSC147, complete genome3-deoxy-D-manno-octulosonic-acid transferase2e-85316
NC_009257:338994:3602313602313615261296Francisella tularensis subsp. tularensis WY96-3418 chromosome,3-deoxy-D-manno-octulosonic-acid transferase2e-85316
NC_017270:220282:2202822202822215621281Vibrio cholerae LMA3984-4 chromosome chromosome I, complete3-deoxy-D-manno-octulosonic-acid transferase6e-85315
NC_007880:508407:5296495296495309441296Francisella tularensis subsp. holarctica, complete genome3-Deoxy-D-manno-octulosonic-acid transferase1e-84314
NC_008369:514995:5333715333715346661296Francisella tularensis subsp. holarctica OSU18, complete genomeKDO transferase (inner core)1e-84314
NC_013959:2892660:2923038292303829243571320Sideroxydans lithotrophicus ES-1 chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein6e-77288
NC_013889:325118:3438783438783451431266Thioalkalivibrio sp. K90mix chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein8e-76284
NC_015633:413587:4190984190984203661269Vibrio anguillarum 775 chromosome chromosome I, complete sequence3-deoxy-D-manno-octulosonic-acid transferase3e-74279
NC_007510:913411:9283049283049296501347Burkholderia sp. 383 chromosome 1, complete sequence3-deoxy-D-manno-octulosonic-acid transferase3e-73275
NC_015856:940625:9775589775589788801323Collimonas fungivorans Ter331 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase7e-70265
NC_017082:6321124:6339661633966163409771317Bradyrhizobium sp. S23321, complete genomeputative 3-deoxy-d-manno-octulosonic-acid transferase1e-69264
NC_010682:661272:6830006830006843161317Ralstonia pickettii 12J chromosome 1, complete sequenceThree-deoxy-D-manno-octulosonic-acid transferase domain protein1e-69264
NC_019978:2396000:2406711240671124090532343Halobacteroides halobius DSM 5150, complete genome3-deoxy-D-manno-octulosonic-acid transferase8e-68258
NC_014311:2781898:2784620278462027859361317Ralstonia solanacearum PSI07 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase2e-67256
NC_017513:9081:1057810578118491272Neisseria meningitidis G2136 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase6e-64244
NC_002939:2454686:2473676247367624749801305Geobacter sulfurreducens PCA, complete genome3-deoxy-D-manno-octulosonic-acid transferase, putative6e-64244
NC_016148:576946:5994915994916006931203Thermovirga lienii DSM 17291 chromosome, complete genomethree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein4e-56219
NC_015388:2211828:2229193222919322304491257Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein1e-55217
NC_014640:6745873:6747858674785867491531296Achromobacter xylosoxidans A8 chromosome, complete genomeKDO transferase8e-55214
NC_011296:801612:8033388033388045941257Thermodesulfovibrio yellowstonii DSM 11347, complete genome3-deoxy-D-manno-octulosonic-acid transferase2e-54213
NC_014972:2659388:2661423266142326627571335Desulfobulbus propionicus DSM 2032 chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein3e-51202
NC_007948:1695500:1696607169660716979321326Polaromonas sp. JS666, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase-like1e-49197
NC_014963:4569015:4580449458044945817681320Terriglobus saanensis SP1PR4 chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein4e-47189
NC_014216:1061265:1079202107920210805901389Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeThree-deoxy-D-manno-octulosonic-acid transferase domain protein5e-45182
NC_017058:129474:1529941529941542501257Rickettsia australis str. Cutlack chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase1e-41171
NC_009881:92929:1179941179941192501257Rickettsia akari str. Hartford, complete genome3-deoxy-D-manno-octulosonic-acid transferase2e-41170
NC_006142:57571:5954259542609301389Rickettsia typhi str. Wilmington, complete genome3-deoxy-D-manno-octulosonic-acid transferase3e-39163
NC_017066:57571:5954259542609301389Rickettsia typhi str. TH1527 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase3e-39163
NC_009882:100000:1183541183541197481395Rickettsia rickettsii str. 'Sheila Smith', complete genome3-deoxy-D-manno-octulosonic-acid transferase3e-38159
NC_016914:99184:1185331185331199271395Rickettsia rickettsii str. Hino chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase4e-38159
NC_016909:100000:1184031184031197971395Rickettsia rickettsii str. Arizona chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase4e-38159
NC_016908:100000:1184201184201198141395Rickettsia rickettsii str. Colombia chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase4e-38159
NC_010263:100000:1184461184461198401395Rickettsia rickettsii str. Iowa, complete genome3-deoxy-D-manno-octulosonic-acid transferase4e-38159
NC_012633:98000:1164601164601178541395Rickettsia africae ESF-5, complete genome3-deoxy-D-manno-octulosonic-acid transferase2e-37156
NC_000963:83408:99717997171011021386Rickettsia prowazekii str. Madrid E, complete genome3-deoxy-D-manno-octulosonic-acid transferase9e-36151
NC_017050:83406:99715997151011001386Rickettsia prowazekii str. Katsinyian chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase9e-36151
NC_017056:86663:99725997251011101386Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase9e-36151
NC_017057:83415:99842998421012271386Rickettsia prowazekii str. RpGvF24 chromosome, complete genome3-deoxy-D-manno-octulosonic-acid transferase1e-35150
NC_012108:2065355:2078025207802520793291305Desulfobacterium autotrophicum HRM2, complete genomeKdtA4e-29129
NC_009615:2674631:2678545267854526797801236Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein7e-29128
NC_015846:67603:8060780607818451239Capnocytophaga canimorsus Cc5 chromosome, complete genomeKDO transferase5e-26119
NC_019960:260997:2609972609972622261230Prevotella dentalis DSM 3688 chromosome 1, complete sequence3-deoxy-D-manno-octulosonic-acid transferase3e-22106
NC_014166:2498500:2504461250446125056131153Arcobacter nitrofigilis DSM 7299 chromosome, complete genome1e-1274.7
NC_008686:2080770:2096063209606320979221860Paracoccus denitrificans PD1222 chromosome 1, complete sequence3-deoxy-D-manno-octulosonic-acid transferase-like3e-1273.6