Pre_GI: BLASTP Hits

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Query: NC_004547:164000:167881 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 167881, End: 168117, Length: 237

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:4790696:481174548117454811981237Pectobacterium wasabiae WPP163, complete genomeribosomal protein L283e-39160
NC_013971:73037:103619103619103855237Erwinia amylovora ATCC 49946 chromosome, complete genome50S ribosomal protein L281e-38157
NC_013961:73037:103619103619103855237Erwinia amylovora, complete genome50S ribosomal protein L281e-38157
NC_016857:3924000:394354139435413943777237Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7450S ribosomal protein L283e-37153
NC_016860:3925500:394512239451223945358237Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L283e-37153
NC_016863:3864000:388352538835253883761237Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L283e-37153
NC_010498:4031500:404945940494594049695237Escherichia coli SMS-3-5, complete genomeribosomal protein L283e-37153
NC_010658:3774110:379426037942603794496237Shigella boydii CDC 3083-94, complete genomeribosomal protein L283e-37153
NC_004431:4223232:424243642424364242672237Escherichia coli CFT073, complete genome50S ribosomal protein L283e-37153
CP002185:3998112:401730740173074017543237Escherichia coli W, complete genome50S ribosomal subunit protein L283e-37153
NC_002655:4606000:462428046242804624516237Escherichia coli O157:H7 EDL933, complete genome50S ribosomal protein L283e-37153
AP010958:4668181:466906646690664669302237Escherichia coli O103:H2 str. 12009 DNA, complete genome50S ribosomal subunit protein L283e-37153
NC_010468:80000:801018010180337237Escherichia coli ATCC 8739, complete genomeribosomal protein L283e-37153
CU928160:3862935:388212138821213882357237Escherichia coli IAI1 chromosome, complete genome50S ribosomal subunit protein L283e-37153
CP002516:88500:885308853088766237Escherichia coli KO11, complete genomeribosomal protein L283e-37153
CU928145:4167043:418646041864604186696237Escherichia coli 55989 chromosome, complete genome50S ribosomal subunit protein L283e-37153
NC_016856:3916500:393591839359183936154237Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S50S ribosomal protein L283e-37153
NC_016810:3923988:394354039435403943776237Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L283e-37153
NC_012125:3840000:385938138593813859617237Salmonella enterica subsp. enterica serovar Paratyphi C strain50S ribosomal protein L283e-37153
NC_011083:3915500:393523639352363935472237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal protein L283e-37153
NC_003197:3902500:392222639222263922462237Salmonella typhimurium LT2, complete genome50S ribosomal protein L283e-37153
NC_004631:3910451:391133439113343911570237Salmonella enterica subsp. enterica serovar Typhi Ty2, complete50S ribosomal protein L283e-37153
NC_003198:3924952:392583539258353926071237Salmonella enterica subsp. enterica serovar Typhi str. CT18,50S ribosomal protein L283e-37153
NC_011149:3822000:384159338415933841829237Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal protein L283e-37153
NC_006905:3845000:386452638645263864762237Salmonella enterica subsp. enterica serovar Choleraesuis str50S ribosomal protein L283e-37153
NC_006511:3690828:371088537108853711121237Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L283e-37153
NC_011080:3875320:389537738953773895613237Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal protein L283e-37153
NC_011094:3778000:379831237983123798548237Salmonella enterica subsp. enterica serovar Schwarzengrund str50S ribosomal protein L283e-37153
NC_011147:3686500:370655537065553706791237Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L283e-37153
NC_011205:3942500:396192739619273962163237Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185350S ribosomal protein L283e-37153
NC_011274:3894387:389527038952703895506237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9150S ribosomal protein L283e-37153
NC_011294:3782655:380333038033303803566237Salmonella enterica subsp. enterica serovar Enteritidis str50S ribosomal protein L283e-37153
NC_010473:3883701:390703839070383907274237Escherichia coli str. K-12 substr. DH10B, complete genome50S ribosomal subunit protein L283e-37153
NC_004741:3992384:399326939932693993505237Shigella flexneri 2a str. 2457T, complete genome50S ribosomal protein L283e-37153
NC_017328:3794105:381395238139523814188237Shigella flexneri 2002017 chromosome, complete genome50S ribosomal protein L283e-37153
NC_011601:4036590:405780840578084058044237Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome50S ribosomal protein L283e-37153
NC_011741:3862935:388212138821213882357237Escherichia coli IAI1 chromosome, complete genome50S ribosomal protein L283e-37153
NC_011742:3998285:401748940174894017725237Escherichia coli S88 chromosome, complete genome50S ribosomal protein L283e-37153
NC_011745:4226186:424560242456024245838237Escherichia coli ED1a chromosome, complete genome50S ribosomal protein L283e-37153
NC_012759:3675396:369778736977873698023237Escherichia coli BW2952 chromosome, complete genome50S ribosomal protein L283e-37153
NC_012967:3729813:374979337497933750029237Escherichia coli B str. REL606 chromosome, complete genome50S ribosomal protein L283e-37153
NC_013008:4595043:461444246144424614678237Escherichia coli O157:H7 str. TW14359 chromosome, complete genome50S ribosomal protein L283e-37153
NC_013353:4668181:466906646690664669302237Escherichia coli O103:H2 str. 12009, complete genome50S ribosomal protein L283e-37153
NC_013361:4991020:499190549919054992141237Escherichia coli O26:H11 str. 11368 chromosome, complete genome50S ribosomal protein L283e-37153
NC_013364:4460500:447883944788394479075237Escherichia coli O111:H- str. 11128, complete genome50S ribosomal protein L283e-37153
NC_013941:4427000:444524244452424445478237Escherichia coli O55:H7 str. CB9615 chromosome, complete genome50S ribosomal protein L283e-37153
NC_016822:4093000:409306840930684093304237Shigella sonnei 53G, complete genome50S ribosomal protein L283e-37153
NC_016902:88500:885308853088766237Escherichia coli KO11FL chromosome, complete genome50S ribosomal protein L283e-37153
NC_011415:4040211:405962840596284059864237Escherichia coli SE11 chromosome, complete genome50S ribosomal protein L283e-37153
NC_011353:4639002:465840146584014658637237Escherichia coli O157:H7 str. EC4115 chromosome, complete genome50S ribosomal protein L283e-37153
NC_009801:4108179:412737441273744127610237Escherichia coli E24377A, complete genomeribosomal protein L283e-37153
NC_004337:3761865:378175237817523781988237Shigella flexneri 2a str. 301, complete genome50S ribosomal protein L283e-37153
NC_011748:4167043:418646041864604186696237Escherichia coli 55989, complete genome50S ribosomal protein L283e-37153
NC_002695:4537000:455529745552974555533237Escherichia coli O157:H7 str. Sakai, complete genome50S ribosomal protein L283e-37153
NC_009800:3821824:384101938410193841255237Escherichia coli HS, complete genomeribosomal protein L283e-37153
NC_004337:3590323:378175237817523781988237Shigella flexneri 2a str. 301, complete genome50S ribosomal protein L283e-37153
NC_011750:4307166:432635843263584326594237Escherichia coli IAI39 chromosome, complete genome50S ribosomal protein L283e-37153
NC_008253:3896704:391590839159083916144237Escherichia coli 536, complete genome50S ribosomal protein L283e-37153
NC_007946:4050762:406996640699664070202237Escherichia coli UTI89, complete genome50S ribosomal subunit protein L283e-37153
NC_011751:4251296:427071642707164270952237Escherichia coli UMN026 chromosome, complete genome50S ribosomal protein L283e-37153
AC_000091:3827856:382874138287413828977237Escherichia coli W3110 DNA, complete genome50S ribosomal subunit protein L283e-37153
NC_000913:3786124:380946138094613809697237Escherichia coli K12, complete genome50S ribosomal protein L283e-37153
NC_011740:4007000:402814940281494028385237Escherichia fergusonii ATCC 35469, complete genome50S ribosomal subunit protein L283e-37153
NC_007606:3784847:380370738037073803943237Shigella dysenteriae Sd197, complete genome50S ribosomal subunit protein L283e-37153
NC_007613:3637832:365703636570363657272237Shigella boydii Sb227, complete genome50S ribosomal subunit protein L289e-37152
NC_016816:127802:147302147302147538237Pantoea ananatis LMG 5342, complete genome50S ribosomal protein L289e-37152
NC_013850:109500:128052128052128288237Klebsiella variicola At-22 chromosome, complete genomeribosomal protein L286e-37152
NC_011283:105245:122856122856123092237Klebsiella pneumoniae 342 chromosome, complete genome50S ribosomal protein L286e-37152
NC_012913:2189862:219413621941362194372237Aggregatibacter aphrophilus NJ8700, complete genomeribosomal protein L289e-33138
NC_013416:386301:398752398752398988237Aggregatibacter actinomycetemcomitans D11S-1, complete genome50S ribosomal protein L282e-32137
NC_016745:675909:678031678031678267237Oceanimonas sp. GK1 chromosome, complete genome50S ribosomal protein L285e-32136
NC_007912:4661141:466349746634974663733237Saccharophagus degradans 2-40, complete genome50S ribosomal subunit protein L283e-31133
NC_011901:342777:366972366972367208237Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete50S ribosomal protein L284e-30129
NC_016845:5162481:516248151624815162681201Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,50S ribosomal protein L281e-29128
NC_010102:3851500:387117338711733871373201Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-29128
NC_016831:3875134:387605338760533876253201Salmonella enterica subsp. enterica serovar Gallinarum/pullorum50S ribosomal protein L281e-29128
NC_016832:3900000:390016739001673900367201Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,50S ribosomal protein L281e-29128
NC_017046:3923000:394236739423673942567201Salmonella enterica subsp. enterica serovar Typhimurium str. 79850S ribosomal protein L281e-29128
NC_008260:228475:233902233902234138237Alcanivorax borkumensis SK2, complete genomeribosomal protein L281e-27122
NC_017986:2548720:255411325541132554349237Pseudomonas putida ND6 chromosome, complete genome50S ribosomal protein L281e-27121
NC_018691:198909:203837203837204073237Alcanivorax dieselolei B5 chromosome, complete genome50S ribosomal protein L284e-27119
NC_007947:290864:307391307391307627237Methylobacillus flagellatus KT, complete genomeribosomal protein L289e-25112
NC_015422:3836911:385705038570503857283234Alicycliphilus denitrificans K601 chromosome, complete genome50S ribosomal protein L282e-24111
NC_012968:381771:393023393023393259237Methylotenera mobilis JLW8, complete genomeribosomal protein L282e-24110
NC_008786:1936626:195706319570631957296234Verminephrobacter eiseniae EF01-2, complete genomeribosomal protein L288e-24108
NC_016513:689689:702141702141702314174Aggregatibacter actinomycetemcomitans ANH9381 chromosome, complete50S ribosomal protein L281e-2098.2
NC_018507:115346:122728122728122943216Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome50S ribosomal protein L286e-1992.8
NC_018677:111500:116295116295116510216Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeLSU ribosomal protein L28p6e-1992.8
NC_009142:827912:847058847058847294237Saccharopolyspora erythraea NRRL 2338, complete genome50S ribosomal protein L286e-1786.3
NC_013715:1907503:192891419289141929150237Rothia mucilaginosa DY-18, complete genomeribosomal protein L287e-1579.3
NC_010830:718614:735533735533735784252Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-1477
NC_013714:2086526:214895221489522149197246Bifidobacterium dentium Bd1, complete genome50S ribosomal protein L28,50S ribosomal protein L281e-1168.9
NC_009565:2306574:232943723294372329673237Mycobacterium tuberculosis F11, complete genome50S ribosomal protein L28 rpmB28e-1062.4
NC_016804:2254979:227784222778422278078237Mycobacterium bovis BCG str. Mexico chromosome, complete genome50S ribosomal protein L288e-1062.4
NC_017026:2286000:230814623081462308382237Mycobacterium tuberculosis RGTB327 chromosome, complete genome50S ribosomal protein L288e-1062.4
NC_017519:672462:678163678163678354192Mycoplasma hyorhinis MCLD chromosome, complete genome50S ribosomal protein L283e-0960.5
NC_016829:624971:634425634425634616192Mycoplasma hyorhinis GDL-1 chromosome, complete genome50S ribosomal protein L283e-0960.5
NC_014448:626909:636364636364636555192Mycoplasma hyorhinis HUB-1 chromosome, complete genome50S ribosomal protein L283e-0960.5
NC_014166:2217790:223196122319612232149189Arcobacter nitrofigilis DSM 7299 chromosome, complete genome50S ribosomal protein L282e-0857.8
NC_010793:1811401:181163518116351811922288Orientia tsutsugamushi str. Ikeda, complete genome50S ribosomal protein L282e-0857.8
NC_010103:1920585:193910819391081939401294Brucella canis ATCC 23365 chromosome I, complete sequenceribosomal protein L284e-0857
NC_006932:1939145:195766119576611957954294Brucella abortus biovar 1 str. 9-941 chromosome I, complete50S ribosomal protein L284e-0857
NC_004310:1923404:194093619409361941229294Brucella suis 1330 chromosome I, complete sequence50S ribosomal protein L284e-0857
NC_015857:1954173:197169719716971971990294Brucella pinnipedialis B2/94 chromosome chromosome 1, complete50S ribosomal protein L284e-0857
NC_010742:1938428:195594719559471956240294Brucella abortus S19 chromosome 1, complete sequenceRibosomal protein L284e-0857
NC_010169:1739402:175692917569291757222294Brucella suis ATCC 23445 chromosome I, complete sequenceribosomal protein L284e-0857
NC_003317:48375:526045260452897294Brucella melitensis 16M chromosome I, complete sequence50S ribosomal protein L284e-0857
NC_007618:1937261:195478019547801955073294Brucella melitensis biovar Abortus 2308 chromosome I, completeRibosomal protein L28:ATP/GTP-binding site motif A (P-loop)4e-0857
NC_012441:1940545:195906419590641959357294Brucella melitensis ATCC 23457 chromosome I, complete sequence50S ribosomal protein L284e-0857
NC_013119:1932402:194993119499311950224294Brucella microti CCM 4915 chromosome 1, complete sequence50S ribosomal protein L284e-0857
NC_017251:1923391:194092319409231941216294Brucella suis 1330 chromosome I, complete genome50S ribosomal protein L284e-0857
NC_017248:1933357:195088319508831951176294Brucella melitensis NI chromosome chromosome I, complete sequence50S ribosomal protein L284e-0857
NC_017246:1942293:195981819598181960111294Brucella melitensis M5-90 chromosome chromosome I, complete50S ribosomal protein L284e-0857
NC_017244:1941974:195949919594991959792294Brucella melitensis M28 chromosome chromosome 1, complete sequence50S ribosomal protein284e-0857
NC_016797:1924248:194177819417781942071294Brucella suis VBI22 chromosome I, complete sequence50S ribosomal protein L284e-0857
NC_016795:456110:460323460323460616294Brucella abortus A13334 chromosome 1, complete sequence50S ribosomal protein L284e-0857
NC_016778:1216739:122098312209831221276294Brucella canis HSK A52141 chromosome 1, complete sequence50S ribosomal protein L284e-0857
NC_009505:1928000:194551219455121945805294Brucella ovis ATCC 25840 chromosome I, complete sequence50S ribosomal protein L283e-0753.9
NC_008319:1272251:127933712793371279573237Synechococcus sp. CC9311, complete genomeribosomal protein L286e-0752.8
NC_009481:1109324:112841111284111128647237Synechococcus sp. WH 7803 chromosome, complete genome50S ribosomal protein L281e-0652.4
NC_006576:1551939:157979215797921580028237Synechococcus elongatus PCC 6301, complete genome50S ribosomal protein L288e-0752.4
NC_005957:3665657:369609336960933696281189Bacillus thuringiensis serovar konkukian str. 97-27, completeribosomal protein L28 (50S ribosomal protein L28)2e-0651.2
NC_014335:3589726:362527536252753625463189Bacillus cereus biovar anthracis str. CI chromosome, complete50S ribosomal protein L282e-0651.2
NC_012472:3705500:372192337219233722111189Bacillus cereus 03BB102, complete genome50S ribosomal protein L282e-0651.2
NC_008600:3686135:370391737039173704105189Bacillus thuringiensis str. Al Hakam, complete genomeribosomal protein L28 (50S ribosomal protein L28)2e-0651.2
NC_012581:559182:563952563952564140189Bacillus anthracis str. CDC 684 chromosome, complete genome50S ribosomal protein L282e-0651.2
NC_007530:3616828:367454636745463674734189Bacillus anthracis str. 'Ames Ancestor', complete genomeribosomal protein l282e-0651.2
NC_003997:3617000:367441936744193674607189Bacillus anthracis str. Ames, complete genomeribosomal protein L282e-0651.2
NC_005945:3636321:367511436751143675302189Bacillus anthracis str. Sterne, complete genomeribosomal protein L282e-0651.2
NC_006274:3736703:375497637549763755164189Bacillus cereus E33L, complete genomeribosomal protein L28 (50S ribosomal protein L28)2e-0651.2
NC_010184:3713359:373333037333303733518189Bacillus weihenstephanensis KBAB4, complete genomeribosomal protein L282e-0651.2
NC_005042:830000:847533847533847781249Prochlorococcus marinus subsp. marinus str. CCMP1375, complete50S ribosomal protein L282e-0651.2
NC_017208:3816753:387453438745343874722189Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete50S ribosomal protein L282e-0651.2
NC_017200:3701043:371882437188243719012189Bacillus thuringiensis serovar finitimus YBT-020 chromosome,50S ribosomal protein L282e-0651.2
NC_016779:3621973:363975536397553639943189Bacillus cereus F837/76 chromosome, complete genome50S ribosomal protein L282e-0651.2
NC_016771:3599170:361496636149663615154189Bacillus cereus NC7401, complete genome50S ribosomal protein L282e-0651.2
NC_011773:3689473:370931037093103709498189Bacillus cereus AH820 chromosome, complete genome50S ribosomal protein L282e-0651.2
NC_011725:3862094:387914238791423879330189Bacillus cereus B4264 chromosome, complete genome50S ribosomal protein L282e-0651.2
NC_011658:3603009:366246836624683662656189Bacillus cereus AH187 chromosome, complete genome50S ribosomal protein L282e-0651.2
NC_006142:33268:494414944149734294Rickettsia typhi str. Wilmington, complete genome50S ribosomal protein L283e-0650.8
NC_017062:33268:494084940849701294Rickettsia typhi str. B9991CWPP chromosome, complete genome50S ribosomal protein L283e-0650.8
NC_017066:33268:494414944149734294Rickettsia typhi str. TH1527 chromosome, complete genome50S ribosomal protein L283e-0650.8
NC_007575:1663088:168295816829581683146189Sulfurimonas denitrificans DSM 1251, complete genome50S ribosomal protein L282e-0650.8
NC_000963:110500:111301111301111594294Rickettsia prowazekii str. Madrid E, complete genome50S ribosomal protein L286e-0649.7
NC_017048:452000:453370453370453663294Rickettsia prowazekii str. GvV257 chromosome, complete genome50S ribosomal protein L286e-0649.7
NC_017049:109000:109500109500109793294Rickettsia prowazekii str. Chernikova chromosome, complete genome50S ribosomal protein L286e-0649.7
NC_017050:110500:111299111299111592294Rickettsia prowazekii str. Katsinyian chromosome, complete genome50S ribosomal protein L286e-0649.7
NC_017051:109000:109503109503109796294Rickettsia prowazekii str. Dachau chromosome, complete genome50S ribosomal protein L286e-0649.7
NC_017056:110500:111309111309111602294Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genome50S ribosomal protein L286e-0649.7
NC_017057:110000:111426111426111719294Rickettsia prowazekii str. RpGvF24 chromosome, complete genome50S ribosomal protein L286e-0649.7
NC_014499:63365:682266822668447222Candidatus Sulcia muelleri CARI chromosome, complete genome50S ribosomal subunit protein L288e-0649.3