Pre_GI: BLASTP Hits

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Query: NC_004547:1600900:1628551 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1628551, End: 1629753, Length: 1203

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1166868:1175333117533311765561224Salmonella enterica subsp. enterica serovar Gallinarum/pullorumO-antigen polymerase3e-68259
NC_011294:1810285:1818045181804518192681224Salmonella enterica subsp. enterica serovar Enteritidis strO-antigen polymerase3e-68259
NC_011205:1938574:1946334194633419475571224Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853O-antigen polymerase3e-68259
NC_011083:1408202:1415130141513014163531224Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,O-antigen polymerase5e-68258
NC_006511:1579776:1587530158753015887531224Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCO-antigen polymerase5e-68258
NC_003197:1401603:1410087141008714113101224Salmonella typhimurium LT2, complete genomeO-antigen polymerase5e-68258
NC_017046:1358531:1367015136701513682381224Salmonella enterica subsp. enterica serovar Typhimurium str. 798O-antigen polymerase7e-68258
NC_016857:1358456:1366940136694013681631224Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74O-antigen polymerase7e-68258
NC_016810:1358456:1366940136694013681631224Salmonella enterica subsp. enterica serovar Typhimurium strO-antigen polymerase7e-68258
NC_004631:1271500:1278530127853012797531224Salmonella enterica subsp. enterica serovar Typhi Ty2, completeO-antigen polymerase5e-68258
NC_003198:1693623:1701377170137717026001224Salmonella enterica subsp. enterica serovar Typhi str. CT18,O-antigen polymerase5e-68258
NC_010102:1703172:1710926171092617121491224Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-68258
NC_011147:1573470:1582711158271115839341224Salmonella enterica subsp. enterica serovar Paratyphi A strO-antigen polymerase5e-68258
NC_016832:1269018:1277503127750312787261224Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,O-antigen polymerase5e-68258
NC_016856:1411579:1420063142006314212861224Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SO-antigen polymerase5e-68258
NC_016860:1399290:1407774140777414089971224Salmonella enterica subsp. enterica serovar Typhimurium strO-antigen polymerase5e-68258
NC_016863:1359769:1368253136825313694761224Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1O-antigen polymerase5e-68258
NC_011274:1850086:1857856185785618590791224Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91O-antigen polymerase4e-68258
NC_012483:30784:6789867898691481251Acidobacterium capsulatum ATCC 51196, complete genomeO-antigen polymerase4e-38159