Pre_GI: BLASTP Hits

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Query: NC_004547:1600900:1624709 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1624709, End: 1626028, Length: 1320

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2156425:2172305217230521736031299Salmonella enterica subsp. enterica serovar Enteritidis strO-antigen transporter2e-44180
NC_011274:2147427:2163307216330721646051299Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91O-antigen transporter2e-44180
NC_016831:854973:8699618699618712441284Salmonella enterica subsp. enterica serovar Gallinarum/pullorumO-antigen transporter2e-44179
NC_003198:2109775:2125658212565821269561299Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative O-antigen transporter4e-44179
NC_004631:862002:8769728769728782701299Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative O-antigen transporter4e-44179
NC_011205:2283438:2299321229932123006041284Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853O-antigen transporter9e-44178
NC_016832:861956:8769418769418782241284Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,O-antigen transporter6e-44178
NC_010102:861860:8758828758828771741293Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-43176
NC_011083:2200613:2216244221624422175241281Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative O-antigen transporter3e-43176
NC_003197:2152994:2168625216862521699171293Salmonella typhimurium LT2, complete genomeputative O-antigen transferase3e-43176
NC_006511:854785:8696768696768709741299Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative O-antigen transporter3e-43176
NC_011147:854730:8696218696218709191299Salmonella enterica subsp. enterica serovar Paratyphi A strO-antigen transporter3e-43176
NC_016810:2150709:2166340216634021676321293Salmonella enterica subsp. enterica serovar Typhimurium strputative O-antigen transporter3e-43176
NC_016856:2204546:2220177222017722214691293Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative O-antigen transferase3e-43176
NC_016857:2150709:2166340216634021676321293Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative O-antigen transporter3e-43176
NC_016863:2152739:2168370216837021696621293Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative O-antigen transferase3e-43176
NC_017046:2150072:2165703216570321669951293Salmonella enterica subsp. enterica serovar Typhimurium str. 798O-antigen transporter3e-43176
NC_011094:2172271:2190167219016721914471281Salmonella enterica subsp. enterica serovar Schwarzengrund strO-antigen transporter2e-43176
NC_011149:2110861:2126490212649021277821293Salmonella enterica subsp. enterica serovar Agona str. SL483,putative O-antigen transporter5e-43175
NC_010465:3465351:3483769348376934850761308Yersinia pseudotuberculosis YPIII, complete genomeLPS side chain defect: putative O-antigen transferase4e-38159
NC_016860:2148535:216416621641662165071906Salmonella enterica subsp. enterica serovar Typhimurium strputative O-antigen transporter5e-31135
NC_006511:854785:8725528725528738591308Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative glycosyltransferase4e-25116
NC_006511:854785:8754378754378767441308Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative glycosyltransferase4e-25116
NC_011979:2352961:2362433236243323636861254Geobacter sp. FRC-32, complete genomepolysaccharide biosynthesis protein1e-22108
NC_009614:1999130:2023957202395720253001344Bacteroides vulgatus ATCC 8482 chromosome, complete genomeLPS biosynthesis related polysaccharide transporter/flippase1e-0861.6
NC_011353:2734222:2748053274805327494381386Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeO antigen flippase3e-0860.1
NC_002695:2769387:2783218278321827846031386Escherichia coli O157:H7 str. Sakai, complete genomeO antigen flippase3e-0860.1
NC_013008:2733203:2747034274703427484251392Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeO antigen flippase3e-0860.1
NC_002655:2839600:2853432285343228548231392Escherichia coli O157:H7 EDL933, complete genomeO antigen flippase Wzx3e-0860.1