Pre_GI: BLASTP Hits

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Query: NC_004547:138500:148811 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 148811, End: 150391, Length: 1581

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015572:1:4863448634501331500Methylomonas methanica MC09 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein2e-117422
NC_007614:109000:1249241249241263931470Nitrosospira multiformis ATCC 25196 chromosome 1, completeCytidine/deoxycytidylate deaminase, zinc-binding region1e-100367
NC_016631:5478098:5491916549191654934541539Granulicella mallensis MP5ACTX8 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein3e-89329
NC_008825:564392:5718055718055733731569Methylibium petroleiphilum PM1, complete genomeputative cytidine deaminase1e-73278
NC_002505:168532:1753431753431769411599Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completedeoxycytidylate deaminase-related protein3e-73276
NC_012667:703852:7236167236167252141599Vibrio cholerae MJ-1236 chromosome 2, complete genomedeoxycytidylate deaminase-related protein3e-73276
NC_012668:442601:4620454620454636431599Vibrio cholerae MJ-1236 chromosome 1, complete sequencedeoxycytidylate deaminase-related protein3e-73276
NC_016445:2593800:2600611260061126022001590Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completedeoxycytidylate deaminase-related protein2e-73276
NC_016944:168530:1753411753411769301590Vibrio cholerae IEC224 chromosome I, complete sequencedeoxycytidylate deaminase-likeprotein2e-73276
NC_011757:276953:2894972894972912061710Methylobacterium chloromethanicum CM4, complete genomeCMP/dCMP deaminase zinc-binding9e-72271
NC_011894:585637:6096256096256113371713Methylobacterium nodulans ORS 2060, complete genomeCMP/dCMP deaminase zinc-binding4e-69262
NC_010172:2082000:2087401208740120888671467Methylobacterium extorquens PA1, complete genomeCMP/dCMP deaminase zinc-binding5e-62239
NC_011004:3582078:3587744358774435892581515Rhodopseudomonas palustris TIE-1, complete genomeCMP/dCMP deaminase zinc-binding4e-60233
NC_004578:20738:5834458344599061563Pseudomonas syringae pv. tomato str. DC3000, complete genomecytidine/deoxycytidylate deaminase family protein1e-58227
NC_014910:465980:5007665007665024391674Alicycliphilus denitrificans BC chromosome, complete genomecmp/dcmp deaminase zinc-binding protein4e-48192
NC_017186:2252438:228089522808952281389495Amycolatopsis mediterranei S699 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein3e-22106
NC_013861:728648:7343167343167358931578Legionella longbeachae NSW150, complete genomecytidine/deoxycytidylate deaminase3e-20100
NC_007963:814148:8218578218578236861830Chromohalobacter salexigens DSM 3043, complete genomeCMP/dCMP deaminase, zinc-binding2e-1687.8
NC_015416:1645419:166117016611701661631462Methanosaeta concilii GP-6 chromosome, complete genomedCMP deaminase2e-1377.4
NC_012780:430653:4370594370594389391881Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencedCMP deaminase2e-1377.4
NC_014836:1180454:119610111961011196565465Desulfurispirillum indicum S5 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein2e-1067.8
NC_007498:1666242:168911816891181689594477Pelobacter carbinolicus DSM 2380, complete genomedeoxycytidylate deaminase4e-0963.5
NC_008529:264000:280313280313280759447Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDeoxycytidylate deaminase1e-0862
NC_008054:272801:285808285808286290483Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative dCMP deaminase1e-0862
NC_019903:3537545:354427835442783544748471Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,deoxycytidylate deaminase2e-0861.2
NC_007955:2074844:208642920864292086884456Methanococcoides burtonii DSM 6242, complete genomeCMP/dCMP deaminase, zinc-binding2e-0757.8
NC_019970:2551607:256020825602082560654447Thermoanaerobacterium thermosaccharolyticum M0795, complete genomedeoxycytidylate deaminase4e-0756.6
NC_015555:2259500:228835222883522288837486Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCMP/dCMP deaminase zinc-binding protein7e-0755.8
NC_017192:88940:111719111719112156438Arcobacter sp. L, complete genomeputative dCMP deaminase2e-0654.7