Pre_GI: BLASTP Hits

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Query: NC_004547:138500:142830 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 142830, End: 143192, Length: 363

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:4662171:467339246733924673760369Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-26116
NC_014618:4657719:467679346767934677149357Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-23107
NC_010943:1426885:144578214457821446138357Stenotrophomonas maltophilia K279a, complete genomehypothetical protein2e-1167.4
NC_013716:5201097:525125052512505251609360Citrobacter rodentium ICC168, complete genomehypothetical protein6e-1062.8
NC_020064:2960332:298180529818052982170366Serratia marcescens FGI94, complete genomehypothetical protein1e-0858.5
NC_004556:1442000:144318414431841443576393Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-0857.4
NC_004556:2495712:249532024953202495715396Xylella fastidiosa Temecula1, complete genomehypothetical protein5e-0856.2
NC_010513:1443787:144528814452881445665378Xylella fastidiosa M12 chromosome, complete genomehypothetical protein1e-0755.1
NC_004556:1442000:144415514441551444556402Xylella fastidiosa Temecula1, complete genomehypothetical protein3e-0753.9
NC_004556:2495712:250156925015692501946378Xylella fastidiosa Temecula1, complete genomehypothetical protein4e-0753.5
NC_010577:2513241:251734825173482517725378Xylella fastidiosa M23, complete genomeprotein of unknown function DUF5964e-0753.5
NC_010513:1443787:144378714437871444164378Xylella fastidiosa M12 chromosome, complete genomehypothetical protein8e-0752.4
NC_010577:2513241:251324125132412513618378Xylella fastidiosa M23, complete genomeprotein of unknown function DUF5961e-0652
NC_004556:2495712:249746224974622497839378Xylella fastidiosa Temecula1, complete genomehypothetical protein1e-0652
NC_004556:2495712:249844524984452498846402Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-0651.2
NC_010577:2513241:251422425142242514601378Xylella fastidiosa M23, complete genomeprotein of unknown function DUF5962e-0651.2