Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:1062410:1078381 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1078381, End: 1079040, Length: 660

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009648:1956070:196472319647231965472750Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative deoxygluconate dehydrogenase8e-76283
NC_012214:474359:476873476873477598726Erwinia pyrifoliae Ep1/96, complete genomeShort-chain dehydrogenase/reductase1e-21103
NC_016845:2729654:274048627404862740689204Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative deoxygluconate dehydrogenase6e-21100
NC_016514:1142607:114991811499181150592675Enterobacter cloacae EcWSU1 chromosome, complete genomeacetyltransferase2e-1685.9
NC_011740:2220251:221951222195122220264753Escherichia fergusonii ATCC 35469, complete genomeRibitol 2-dehydrogenase (RDH)4e-1065.1
NC_018664:1699618:171096517109651711702738Clostridium acidurici 9a chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] reductase FabG5e-1064.7
NC_008278:132000:148083148083148817735Frankia alni ACN14a, complete genomeputative short chain oxidoreductase2e-0962.8
NC_008278:667023:6872316872316883551125Frankia alni ACN14a, complete genomeputative Short-chain dehydrogenase/reductase2e-0962.8
NC_007355:3153386:316853131685313169241711Methanosarcina barkeri str. fusaro chromosome 1, complete sequence3-oxoacyl-(acyl-carrier protein) reductase7e-0960.5
NC_009792:642881:664236664236665072837Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-0960.5
NC_014532:2146466:215159621515962152426831Halomonas elongata DSM 2581, complete genomeshort chain dehydrogenase1e-0860.1
NC_012660:3689223:369569136956913696515825Pseudomonas fluorescens SBW25 chromosome, complete genomeshort chain dehydrogenase1e-0860.1
NC_020156:3157899:316464931646493165482834Nonlabens dokdonensis DSW-6, complete genomeputative dehydrogenase1e-0860.1
NC_010545:83353:898388983890587750Corynebacterium urealyticum DSM 7109, complete genomeputative oxidoreductase1e-0859.7
NC_011894:6516856:653829865382986539125828Methylobacterium nodulans ORS 2060, complete genomeshort-chain dehydrogenase/reductase SDR2e-0859.3
NC_008595:661507:683360683360684187828Mycobacterium avium 104, complete genomeshort chain dehydrogenase2e-0859.3
NC_017208:3816753:386638738663873867127741Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete3-ketoacyl-ACP reductase2e-0859.3
NC_011772:3821917:383671238367123837452741Bacillus cereus G9842, complete genome3-oxoacyl-(acyl-carrier-protein) reductase3e-0858.9
NC_011725:3862094:387099538709953871735741Bacillus cereus B4264 chromosome, complete genome3-ketoacyl-ACP reductase2e-0858.9
NC_016582:9664000:967547896754789676182705Streptomyces bingchenggensis BCW-1 chromosome, complete genome3-oxoacyl-ACP reductase3e-0858.5
NC_014844:3015738:303146330314633032206744Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase3e-0858.5
NC_012028:514000:514024514024514803780Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genomeshort-chain dehydrogenase/reductase SDR4e-0858.2
NC_007907:2995889:302940730294073030150744Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0858.2
NC_011830:4031901:405689840568984057641744Desulfitobacterium hafniense DCB-2, complete genome3-oxoacyl-(acyl-carrier-protein) reductase4e-0858.2
NC_016025:596670:624961624961625797837Candidatus Chloracidobacterium thermophilum B chromosome chromosomeshort-chain dehydrogenase6e-0857.8
NC_010511:6169468:618283861828386183596759Methylobacterium sp. 4-46 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR6e-0857.8
NC_014364:3707311:371827237182723719051780Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR5e-0857.8
NC_014837:1873020:188511018851101885865756Pantoea sp. At-9b chromosome, complete genomeshort-chain dehydrogenase/reductase SDR8e-0857
NC_013956:1762171:179524217952421796084843Pantoea ananatis LMG 20103 chromosome, complete genomeYusZ8e-0857
NC_009952:526456:541133541133541858726Dinoroseobacter shibae DFL 12, complete genomeribitol 2-dehydrogenase9e-0857
NC_014364:394899:439020439020439793774Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-0757
NC_004193:701622:713193713193713966774Oceanobacillus iheyensis HTE831, complete genomegluconate 5-dehydrogenase2e-0756.2
NC_014624:1675500:171640217164021717196795Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0756.2
NC_010677:707881:709964709964710707744Francisella tularensis subsp. mediasiatica FSC147, complete genomebeta-ketoacyl-ACP reductase2e-0756.2
NC_009952:526456:539847539847540614768Dinoroseobacter shibae DFL 12, complete genomeshort-chain dehydrogenase/reductase SDR1e-0756.2
NC_017506:2993679:299605129960512996821771Marinobacter adhaerens HP15 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR2e-0755.8
NC_019903:2708500:271758627175862718329744Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,3-oxoacyl-(acyl-carrier-protein) reductase2e-0755.8
NC_010184:3713359:372504737250473725787741Bacillus weihenstephanensis KBAB4, complete genome3-oxoacyl-(acyl-carrier-protein) reductase2e-0755.8
NC_015410:3093465:312587231258723126579708Pseudomonas mendocina NK-01 chromosome, complete genomeshort chain dehydrogenase2e-0755.8
NC_008278:2863355:287856128785612879457897Frankia alni ACN14a, complete genomeputative 2,5-dichloro-2,5-cyclohexadiene-1, 4-diol dehydrogenase (2,5-DDOL dehydrogenase), a lindane-degrading protein3e-0755.5
NC_012559:1064821:107850910785091079108600Laribacter hongkongensis HLHK9, complete genomePhaB3e-0755.5
NC_008369:1083598:108531810853181086061744Francisella tularensis subsp. holarctica OSU18, complete genome3-oxoacyl-[acyl-carrier-protein] reductase3e-0755.5
NC_008245:1405000:142086714208671421610744Francisella tularensis subsp. tularensis FSC 198, complete genome3-oxoacyl-(acyl-carrier-protein) reductase3e-0755.5
NC_007880:1079634:108135410813541082097744Francisella tularensis subsp. holarctica, complete genome3-oxoacyl-(acyl-carrier-protein) reductase3e-0755.5
NC_006570:1405178:142106114210611421804744Francisella tularensis subsp. tularensis Schu 4, complete genome3-oxoacyl-(acyl-carrier-protein) reductase3e-0755.5
NC_009257:503371:503371503371504114744Francisella tularensis subsp. tularensis WY96-3418 chromosome,3-oxoacyl-(acyl-carrier-protein) reductase3e-0755.5
NC_016933:1481000:149683314968331497576744Francisella tularensis TIGB03 chromosome, complete genome3-oxoacyl-ACP reductase3e-0755.5
NC_016937:1405000:142092614209261421669744Francisella tularensis subsp. tularensis TI0902 chromosome,3-oxoacyl-ACP reductase3e-0755.5
NC_008601:1404933:141856314185631419306744Francisella tularensis subsp. novicida U112, complete genomebeta-ketoacyl-ACP reductase2e-0755.5
NC_009512:3334579:335905733590573359794738Pseudomonas putida F1, complete genomeshort-chain dehydrogenase/reductase SDR2e-0755.5
NC_005773:1675793:169785116978511698612762Pseudomonas syringae pv. phaseolicola 1448A, complete genomeoxidoreductase, short-chain dehydrogenase/reductase family4e-0755.1
NC_009338:817854:818834818834819598765Mycobacterium gilvum PYR-GCK chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.1
NC_017200:3701043:371067737106773711417741Bacillus thuringiensis serovar finitimus YBT-020 chromosome,3-ketoacyl-ACP reductase3e-0755.1
NC_010723:1133163:115030711503071151107801Clostridium botulinum E3 str. Alaska E43, complete genomeoxidoreductase, short chain dehydrogenase/reductase family4e-0754.7
NC_003909:3606177:364167236416723642412741Bacillus cereus ATCC 10987, complete genome3-ketoacyl-(acyl-carrier-protein) reductase5e-0754.7
NC_013929:8474195:851034785103478511069723Streptomyces scabiei 87.22 chromosome, complete genomeshort chain dehydrogenase/reductase5e-0754.7
NC_005945:3636321:366696636669663667706741Bacillus anthracis str. Sterne, complete genome3-ketoacyl-(acyl-carrier-protein) reductase7e-0754.3
NC_007530:3616828:366639836663983667138741Bacillus anthracis str. 'Ames Ancestor', complete genome3-ketoacyl-(acyl-carrier-protein) reductase7e-0754.3
NC_012472:3705500:371377537137753714515741Bacillus cereus 03BB102, complete genome3-oxoacyl-[acyl-carrier-protein] reductase7e-0754.3
NC_003997:3617000:366627136662713667011741Bacillus anthracis str. Ames, complete genome3-ketoacyl-(acyl-carrier-protein) reductase7e-0754.3
NC_006274:3736703:374682937468293747569741Bacillus cereus E33L, complete genome3-ketoacyl-(acyl-carrier-protein) reductase7e-0754.3
NC_008600:3686135:369576936957693696509741Bacillus thuringiensis str. Al Hakam, complete genome3-oxoacyl-[acyl-carrier protein] reductase 1 (3-ketoacyl-acyl carrier protein reductase 1)7e-0754.3
NC_014335:3589726:361712736171273617867741Bacillus cereus biovar anthracis str. CI chromosome, complete3-ketoacyl-(acyl-carrier-protein) reductase7e-0754.3
NC_005957:3665657:368794536879453688685741Bacillus thuringiensis serovar konkukian str. 97-27, complete3-ketoacyl-(acyl-carrier-protein) reductase7e-0754.3
NC_011773:3689473:370116237011623701902741Bacillus cereus AH820 chromosome, complete genome3-ketoacyl-ACP reductase7e-0754.3
NC_016771:3599170:360681936068193607559741Bacillus cereus NC7401, complete genome3-oxoacyl-(acyl-carrier-protein) reductase5e-0754.3
NC_011658:3603009:365432136543213655061741Bacillus cereus AH187 chromosome, complete genome3-ketoacyl-ACP reductase5e-0754.3
NC_008314:1465643:147956614795661480354789Ralstonia eutropha H16 chromosome 2, complete sequenceshort chain dehydrogenase6e-0754.3
NC_015976:2023540:204640820464082047163756Sphingobium sp. SYK-6, complete genomeputative oxidoreductase7e-0754.3
NC_012659:3617000:366629836662983667038741Bacillus anthracis str. A0248, complete genome3-ketoacyl-ACP reductase7e-0754.3
NC_012581:559182:571548571548572288741Bacillus anthracis str. CDC 684 chromosome, complete genome3-ketoacyl-ACP reductase7e-0754.3
NC_015391:2449927:246838624683862469207822Carnobacterium sp. 17-4 chromosome, complete genomegluconate 5-dehydrogenase9e-0753.9
NC_012988:4633930:465617646561764656997822Methylobacterium extorquens DM4, complete genomeshort-chain dehydrogenase/reductase SDR9e-0753.9
NC_013928:395028:418936418936419670735Streptococcus mutans NN2025, complete genome3-oxoacyl-ACP reductase1e-0653.5
NC_014479:2505823:252980825298082530566759Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeshort chain dehydrogenase1e-0653.5
NC_010336:1468760:147079714707971471540744Francisella philomiragia subsp. philomiragia ATCC 25017, completebeta-ketoacyl-ACP reductase9e-0753.5
NC_010674:1170264:118638611863861187186801Clostridium botulinum B str. Eklund 17B, complete genomeoxidoreductase, short chain dehydrogenase/reductase family1e-0653.1
NC_019973:5989816:599127159912715992008738Mesorhizobium australicum WSM2073, complete genome3-oxoacyl-(acyl-carrier-protein) reductase2e-0652.8
NC_015675:6615245:661698266169826617719738Mesorhizobium opportunistum WSM2075 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase2e-0652.8
NC_014923:6060859:606231460623146063051738Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete3-oxoacyl-(acyl-carrier-protein) reductase2e-0652.8
NC_011757:1553500:157123015712301571970741Methylobacterium chloromethanicum CM4, complete genomeshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_015856:764651:781410781410782249840Collimonas fungivorans Ter331 chromosome, complete genomeshort-chain alcohol dehydrogenases-like protein2e-0652.8
NC_010688:3229820:326822732682273268958732Xanthomonas campestris pv. campestris, complete genomeshort-chain oxidoreductase2e-0652.8
NC_003902:1680414:167968916796891680420732Xanthomonas campestris pv. campestris str. ATCC 33913, completeshort chain dehydrogenase2e-0652.8
NC_010172:4185904:420939742093974210218822Methylobacterium extorquens PA1, complete genomeshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_011146:2485625:249945224994522500213762Geobacter bemidjiensis Bem, complete genomeshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_010001:649000:657952657952658692741Clostridium phytofermentans ISDg, complete genome3-oxoacyl-(acyl-carrier-protein) reductase2e-0652.8
NC_012988:1817000:183469718346971835512816Methylobacterium extorquens DM4, complete genomeshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_010382:1607013:161174116117411612487747Lysinibacillus sphaericus C3-41, complete genome3-oxoacyl-(acyl-carrier protein) reductase2e-0652.8
NC_011661:409943:428146428146428943798Dictyoglomus turgidum DSM 6724, complete genomeshort-chain dehydrogenase/reductase SDR2e-0652.8
NC_008463:4133700:415105841510584151864807Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative dehydrogenase/reductase2e-0652.4
NC_014840:205723:241742241742242494753Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceshort-chain dehydrogenase/reductase SDR2e-0652.4
NC_014306:642152:658360658360659175816Erwinia billingiae Eb661, complete genomeShort-chain dehydrogenase/reductase2e-0652.4
NC_013592:2968500:298364629836462984407762Dickeya dadantii Ech586, complete genomeshort-chain dehydrogenase/reductase SDR3e-0652
NC_011144:1264871:128172912817291282493765Phenylobacterium zucineum HLK1, complete genome3-oxoacyl-[ACP] reductase3e-0652
NC_016584:4860360:489458048945804895323744Desulfosporosinus orientis DSM 765 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase3e-0652
NC_010831:173499:175963175963176700738Chlorobium phaeobacteroides BS1, complete genome3-oxoacyl-(acyl-carrier-protein) reductase4e-0651.6
NC_014623:3503218:351743235174323518130699Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeshort-chain dehydrogenase/reductase5e-0651.2
NC_008786:738791:744941744941745636696Verminephrobacter eiseniae EF01-2, complete genomeshort-chain dehydrogenase/reductase SDR5e-0651.2
NC_015948:2367000:238125323812532382026774Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeoxidoreductase5e-0651.2
NC_003295:3421520:347133434713343472140807Ralstonia solanacearum GMI1000, complete genomeshort chain dehydrogenase6e-0650.8
NC_015957:527777:528206528206528961756Streptomyces violaceusniger Tu 4113 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR8e-0650.4
NC_013929:6923884:693645669364566937271816Streptomyces scabiei 87.22 chromosome, complete genomeoxidoreductase8e-0650.4
NC_013592:1602242:160535116053511606157807Dickeya dadantii Ech586, complete genomeshort-chain dehydrogenase/reductase SDR9e-0650.4
UCMB5137:1159520:116421511642151164955741Bacillus atrophaeus UCMB-5137hypothetical protein1e-0550.4