Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:1062410:1074890 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1074890, End: 1075132, Length: 243

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3982383:399572939957293995977249Dickeya dadantii Ech703, complete genome6e-33139
NC_012917:3378759:338411533841153384330216Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp3e-29126
NC_014500:894136:906023906023906268246Dickeya dadantii 3937 chromosome, complete genometranscriptional regulator2e-27120
NC_014500:3519722:353207735320773532292216Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism4e-27120
NC_014500:1066911:108564110856411085868228Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-25114
NC_012880:3748665:377718637771863777431246Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp2e-25114
NC_013592:956829:975937975937976158222Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp2e-25114
NC_003198:4513900:453731245373124537533222Salmonella enterica subsp. enterica serovar Typhi str. CT18,transcriptional regulatory protein1e-24112
NC_013421:701005:750806750806751027222Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp5e-25112
NC_010067:3204682:321061132106113210832222Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-24108
NC_016845:4498097:451548245154824515733252Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp1e-23108
NC_016845:4498097:451313245131324513392261Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp3e-23107
NC_005810:1230976:123355212335521233854303Yersinia pestis biovar Microtus str. 91001, complete genomeputative regulator5e-23106
NC_004088:1265730:128054012805401280842303Yersinia pestis KIM, complete genomeregulator5e-23106
NC_008149:1195614:121048112104811210726246Yersinia pestis Nepal516, complete genomeDNA-binding protein5e-23106
NC_008150:2822689:282658828265882826833246Yersinia pestis Antiqua, complete genomeputative DNA-binding protein5e-23106
NC_003143:3115933:312031631203163120561246Yersinia pestis CO92, complete genomeputative DNA-binding protein5e-23106
NC_017168:2626996:264186326418632642108246Yersinia pestis A1122 chromosome, complete genomeputative regulator5e-23106
NC_012880:3915500:393652639365263936789264Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp4e-23106
NC_012912:1701231:173017617301761730448273Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp8e-23105
NC_005126:1265071:126667212666721266932261Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-22105
NC_016818:3887000:391724339172433917500258Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator2e-22104
NC_013421:1819036:184323518432351843615381Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp9e-22102
NC_013282:551219:574205574205574480276Cronobacter turicensis, complete genomeSugar fermentation stimulation protein B8e-22102
NC_012912:4194821:419513241951324195398267Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp1e-21101
NC_014500:443874:462414462414462680267Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism1e-21101
NC_012880:4117376:411737641173764117642267Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp1e-21101
NC_016818:859181:877253877253877534282Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator1e-21101
NC_013592:4295449:429793042979304298196267Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp2e-21101
NC_020260:3355814:337700333770033377293291Cronobacter sakazakii Sp291, complete genomesugar fermentation stimulation protein B4e-21100
NC_014618:4114004:411814141181414118395255Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp2e-21100
NC_012880:3748665:375661837566183756890273Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp7e-2199
NC_014618:1103239:112429011242901124538249Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp1e-2098.2
NC_014500:3097362:313990431399043140215312Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism1e-2098.2
NC_014228:3282500:331666433166643316930267Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)2e-2097.8
NC_014228:3391500:339434533943453394614270Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)2e-2097.8
NC_020063:1051310:105732610573261057580255Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator5e-2096.3
NC_013892:1483000:149894614989461499230285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism1e-1995.5
NC_014228:3391500:342080434208043421088285Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein B (Ner-like protein)1e-1995.5
NC_013892:3278647:329793132979313298215285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism9e-2095.5
NC_014500:3097362:314118531411853141490306Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism1e-1995.1
NC_012912:1701231:171672517167251717012288Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp4e-1993.6
NC_003197:2870268:288882428888242889108285Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein4e-1993.2
NC_009648:3224495:324306232430623243346285Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative cytoplasmic protein4e-1993.2
NC_011083:2847318:286333028633302863614285Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,regulator for maltose metabolism4e-1993.2
NC_016810:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium strregulator for maltose metabolism4e-1993.2
NC_016856:2896630:290904929090492909333285Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein4e-1993.2
NC_016857:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein4e-1993.2
NC_016860:2896254:291239029123902912674285Salmonella enterica subsp. enterica serovar Typhimurium strmaltose metabolism regulator4e-1993.2
NC_016863:2844883:285730228573022857586285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-1993.2
NC_017046:2896651:291013129101312910415285Salmonella enterica subsp. enterica serovar Typhimurium str. 798regulator for maltose metabolism4e-1993.2
NC_012917:4646491:465410646541064654363258Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp9e-1992
NC_014500:4691915:469834046983404698597258Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism9e-1992
NC_014228:3391500:340251634025163402776261Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein (Ner-like protein) (fragment)1e-1891.7
NC_013592:4511478:453214945321494532406258Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp2e-1891.3
NC_013716:5201097:521703852170385217226189Citrobacter rodentium ICC168, complete genomehypothetical protein3e-1787
NC_012214:474359:492274492274492603330Erwinia pyrifoliae Ep1/96, complete genomesugar fermentation stimulation protein B3e-1787
NC_013961:441719:475545475545475874330Erwinia amylovora, complete genomeSugar fermentation stimulation protein B4e-1786.7
NC_021066:3201500:321518432151843215456273Raoultella ornithinolytica B6, complete genomehypothetical protein4e-1580.1
NC_014228:3282500:328505932850593285277219Xenorhabdus nematophila ATCC 19061, complete genomePutatiave helix-turn-helix regulatory protein6e-1579.7
NC_020063:2785652:279681027968102797070261Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator1e-1479