Pre_GI: BLASTN Hits

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Query: NC_004463:9087290 Bradyrhizobium japonicum USDA 110, complete genome

Start: 9087290, End: 9110999, Length: 23710

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010725:3273261*3273261329669423434Methylobacterium populi BJ001, complete genome0803BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome1e-103385BLASTN svgBLASTP svg
NC_009668:445134*44513451474969616Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence6e-66260BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome5e-57230BLASTN svgBLASTP svg
NC_011004:1136895*1136895116187724983Rhodopseudomonas palustris TIE-1, complete genome2e-41178BLASTN svgBLASTP svg
NC_011958:73575573575578945053696Rhodobacter sphaeroides KD131 chromosome 2, complete genome2e-38168BLASTN svgBLASTP svg
NC_013856:16997416997418959919626Azospirillum sp. B510 plasmid pAB510b, complete sequence7e-38167BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence3e-37165BLASTN svgBLASTP svg
NC_011958:1121387*1121387114659925213Rhodobacter sphaeroides KD131 chromosome 2, complete genome4e-36161BLASTN svgBLASTP svg
NC_011958:53426*534267609922674Rhodobacter sphaeroides KD131 chromosome 2, complete genome4e-36161BLASTN svgBLASTP svg
NC_011958:976500976500101879142292Rhodobacter sphaeroides KD131 chromosome 2, complete genome4e-36161BLASTN svgBLASTP svg
NC_015976:31188043118804314699128188Sphingobium sp. SYK-6, complete genome1e-33153BLASTN svgBLASTP svg
NC_015976:24060362406036242731421279Sphingobium sp. SYK-6, complete genome1e-33153BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome1e-33153BLASTN svgBLASTP svg
NC_014217:29874502987450301014422695Starkeya novella DSM 506 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_003911:633393*63339366026126869Silicibacter pomeroyi DSS-3, complete genome3e-24121BLASTN svgBLASTP svg
NC_015580:29380329380333787344071Novosphingobium sp. PP1Y, complete genome1e-23119BLASTN svgBLASTP svg
NC_009720:62226262226265580233541Xanthobacter autotrophicus Py2, complete genome5e-23117BLASTN svgBLASTP svg
NC_010172:38946523894652393647541824Methylobacterium extorquens PA1, complete genome1e-20109BLASTN svgBLASTP svg
NC_013235:3812838*3812838384142328586Nakamurella multipartita DSM 44233, complete genome8e-19103BLASTN svgBLASTP svg
NC_010510:31093831093833289021953Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete3e-18101BLASTN svgBLASTP svg
NC_009720:5046861*5046861507080323943Xanthobacter autotrophicus Py2, complete genome3e-18101BLASTN svgBLASTP svg
NC_008687:96515296515299188826737Paracoccus denitrificans PD1222 chromosome 2, complete sequence3e-18101BLASTN svgBLASTP svg
NC_013235:13544431354443137485420412Nakamurella multipartita DSM 44233, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete3e-1591.7BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_011894:3988500*3988500401357725078Methylobacterium nodulans ORS 2060, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003317:14438741443874146565121778Brucella melitensis 16M chromosome I, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete8e-1383.8BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete8e-1383.8BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_015186:2931000*2931000296035629357Acidiphilium multivorum AIU301, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010125:10517351051735108259930865Gluconacetobacter diazotrophicus PAl 5, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012796:16006001600600163027529676Desulfovibrio magneticus RS-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:15019521501952152412822177Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:12006051200605122046619862Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011894:6888562*6888562695715868597Methylobacterium nodulans ORS 2060, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008752:32176953217695323954921855Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008752:29369332936933297832941397Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:25114232511423253417122749Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:29496972949697297109921403Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:4210029*4210029424439734369Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014931:55739425573942559409920158Variovorax paradoxus EPS chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002678:37015003701500374659945100Mesorhizobium loti MAFF303099, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009077:2308634*2308634235649847865Mycobacterium sp. JLS, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012590:37697*376977357935883Corynebacterium aurimucosum ATCC 700975, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018691:359695*35969537768217988Alcanivorax dieselolei B5 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013209:2582878*2582878262254039663Acetobacter pasteurianus IFO 3283-01, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007164:14343051434305147733743033Corynebacterium jeikeium K411, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome3e-0661.9BLASTN svgBLASTP svg