Pre_GI: BLASTN Hits

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Query: NC_004463:9031331 Bradyrhizobium japonicum USDA 110, complete genome

Start: 9031331, End: 9049790, Length: 18460

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome4e-63250BLASTN svgBLASTP svg
NC_004463:21180002118000214009922100Bradyrhizobium japonicum USDA 110, complete genome2e-59238BLASTN svgBLASTP svg
NC_000914:13553413553415858523052Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence2e-52214BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome9e-43182BLASTN svgBLASTP svg
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome8e-34153BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome7e-28133BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome9e-0969.9BLASTN svgBLASTP svg