Pre_GI: BLASTN Hits

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Query: NC_004463:7683426 Bradyrhizobium japonicum USDA 110, complete genome

Start: 7683426, End: 7702873, Length: 19448

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008435:1131242*1131242118022248981Rhodopseudomonas palustris BisA53, complete genome6e-53216BLASTN svgBLASTP svg
NC_007958:4371125*4371125441443443310Rhodopseudomonas palustris BisB5, complete genome9e-46192BLASTN svgBLASTP svg
NC_015675:2247960*2247960227609928140Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-30141BLASTN svgBLASTP svg
NC_004463:57224685722468574221819751Bradyrhizobium japonicum USDA 110, complete genome3e-21111BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012969:2136243*2136243222535089108Methylovorus glucosetrophus SIP3-4 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012968:2000218*2000218202098120764Methylotenera mobilis JLW8, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004463:23441282344128236509920972Bradyrhizobium japonicum USDA 110, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_014733:2095996*2095996211863222637Methylovorus sp. MP688 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_019907:920797*92079794568724891Liberibacter crescens BT-1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020453:7409402*7409402743330123900Agromonas oligotrophica S58 DNA, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014774:1057856*1057856107976721912Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete9e-0969.9BLASTN svgBLASTP svg
NC_013131:7889127*7889127791526926143Catenulispora acidiphila DSM 44928, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007940:266000*26600028816822169Rickettsia bellii RML369-C, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_005363:25888522588852260788319032Bdellovibrio bacteriovorus HD100, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008260:21423112142311216901926709Alcanivorax borkumensis SK2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010581:29990022999002304648947488Beijerinckia indica subsp. indica ATCC 9039, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009465:29735*297358609956365Candidatus Vesicomyosocius okutanii HA, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008435:854576*85457687728822713Rhodopseudomonas palustris BisA53, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007086:557789*55778958514427356Xanthomonas campestris pv. campestris str. 8004, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004556:19339441933944195609922156Xylella fastidiosa Temecula1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003902:555699*55569958306027362Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-0765.9BLASTN svgBLASTP svg
NC_011071:27702292770229280412433896Stenotrophomonas maltophilia R551-3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014761:2189500*2189500221744427945Oceanithermus profundus DSM 14977 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019968:1084288*1084288113090746620Prevotella dentalis DSM 3688 chromosome 2, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_020064:37904723790472381935828887Serratia marcescens FGI94, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_016026:2082500*2082500211358331084Micavibrio aeruginosavorus ARL-13 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009952:2381601*2381601241824736647Dinoroseobacter shibae DFL 12, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009850:1862602*1862602190488342282Arcobacter butzleri RM4018, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014722:115359353593Burkholderia rhizoxinica HKI 454, complete genome9e-0660BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome9e-0660BLASTN svgBLASTP svg
NC_007798:213069*21306923654123473Neorickettsia sennetsu str. Miyayama, complete genome9e-0660BLASTN svgBLASTP svg