Pre_GI: BLASTN Hits

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Query: NC_004463:5540924 Bradyrhizobium japonicum USDA 110, complete genome

Start: 5540924, End: 5568417, Length: 27494

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome01939BLASTN svgBLASTP svg
NC_007925:2892371*2892371291163119261Rhodopseudomonas palustris BisB18, complete genome4e-175622BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome2e-53218BLASTN svgBLASTP svg
NC_002678:48591114859111488349624386Mesorhizobium loti MAFF303099, complete genome5e-42180BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence3e-37165BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome3e-34155BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-24123BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-24123BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-24123BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-24123BLASTN svgBLASTP svg
NC_015717:24793942479394250178522392Hyphomicrobium sp. MC1, complete genome4e-24121BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_007951:20873852087385211670629322Burkholderia xenovorans LB400 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_007951:2206263*2206263222784621584Burkholderia xenovorans LB400 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_007952:32382413238241325679118551Burkholderia xenovorans LB400 chromosome 2, complete sequence4e-21111BLASTN svgBLASTP svg
NC_011894:71093747109374713217722804Methylobacterium nodulans ORS 2060, complete genome4e-21111BLASTN svgBLASTP svg
NC_009439:60850060850063027421775Pseudomonas mendocina ymp, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_007925:10855001085500111052825029Rhodopseudomonas palustris BisB18, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_011004:40739164073916411759943684Rhodopseudomonas palustris TIE-1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_014958:33938553393855341275318899Deinococcus maricopensis DSM 21211 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013440:38131323813132384058127450Haliangium ochraceum DSM 14365, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006138:1571878*1571878159099419117Desulfotalea psychrophila LSv54, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008278:53997155399715542275223038Frankia alni ACN14a, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007777:47966274796627481750420878Frankia sp. CcI3, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011894:3988500*3988500401357725078Methylobacterium nodulans ORS 2060, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002937:1764117*1764117182574661630Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete8e-1073.8BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_016002:10484201048420108220633787Pseudogulbenkiania sp. NH8B, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015635:48643494864349488758323235Microlunatus phosphovorus NM-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004463:57224685722468574221819751Bradyrhizobium japonicum USDA 110, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_021150:34164503416450343409917650Azotobacter vinelandii CA6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019902:18631621863162188731124150Thioalkalivibrio nitratireducens DSM 14787, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012560:34164513416451343409917649Azotobacter vinelandii DJ, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006513:148950*14895017362324674Azoarcus sp. EbN1, complete genome3e-0661.9BLASTN svgBLASTP svg