Query: NC_004463:5110709 Bradyrhizobium japonicum USDA 110, complete genome
Start: 5110709, End: 5128599, Length: 17891
Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_007964:2152000 | 2152000 | 2174130 | 22131 | Nitrobacter hamburgensis X14, complete genome | 0 | 2274 | BLASTN svg | BLASTP svg |
| NC_004463:8401060 | 8401060 | 8453099 | 52040 | Bradyrhizobium japonicum USDA 110, complete genome | 0 | 1703 | BLASTN svg | BLASTP svg |
| NC_020301:853267 | 853267 | 879839 | 26573 | Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
| NC_003366:2556457 | 2556457 | 2579599 | 23143 | Clostridium perfringens str. 13, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_003366:64908* | 64908 | 113675 | 48768 | Clostridium perfringens str. 13, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008261:2770468* | 2770468 | 2795790 | 25323 | Clostridium perfringens ATCC 13124, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008261:64678* | 64678 | 101248 | 36571 | Clostridium perfringens ATCC 13124, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008262:101731* | 101731 | 125280 | 23550 | Clostridium perfringens SM101, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008262:2433979* | 2433979 | 2468482 | 34504 | Clostridium perfringens SM101, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008262:67711* | 67711 | 91099 | 23389 | Clostridium perfringens SM101, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_010172:3413392* | 3413392 | 3436768 | 23377 | Methylobacterium extorquens PA1, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_009828:1530732* | 1530732 | 1555648 | 24917 | Thermotoga lettingae TMO, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010793:1811401* | 1811401 | 1871543 | 60143 | Orientia tsutsugamushi str. Ikeda, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_011126:1345984* | 1345984 | 1368352 | 22369 | Hydrogenobaculum sp. Y04AAS1, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014734:1757995* | 1757995 | 1780554 | 22560 | Paludibacter propionicigenes WB4 chromosome, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015557:1333158* | 1333158 | 1358355 | 25198 | Hydrogenobaculum sp. 3684 chromosome, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_020411:1333352* | 1333352 | 1358549 | 25198 | Hydrogenobaculum sp. HO, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_004557:1* | 1 | 11397 | 11397 | Clostridium tetani E88, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010674:3674739* | 3674739 | 3722211 | 47473 | Clostridium botulinum B str. Eklund 17B, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010674:426256* | 426256 | 452294 | 26039 | Clostridium botulinum B str. Eklund 17B, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010723:3530000* | 3530000 | 3579600 | 49601 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010723:420025* | 420025 | 446616 | 26592 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013171:228356* | 228356 | 254889 | 26534 | Anaerococcus prevotii DSM 20548, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_020291:795500* | 795500 | 854572 | 59073 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_020291:6216000* | 6216000 | 6252473 | 36474 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_006347:2327018* | 2327018 | 2350344 | 23327 | Bacteroides fragilis YCH46, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |