Query: NC_004463:3857763 Bradyrhizobium japonicum USDA 110, complete genome
Start: 3857763, End: 3876804, Length: 19042
Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008536:5259438 | 5259438 | 5279365 | 19928 | Solibacter usitatus Ellin6076, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_008541:3282415* | 3282415 | 3307664 | 25250 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_016002:2453919 | 2453919 | 2500295 | 46377 | Pseudogulbenkiania sp. NH8B, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007498:2046935 | 2046935 | 2069204 | 22270 | Pelobacter carbinolicus DSM 2380, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_007333:2674596 | 2674596 | 2700477 | 25882 | Thermobifida fusca YX, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_011894:3885490 | 3885490 | 3908120 | 22631 | Methylobacterium nodulans ORS 2060, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011886:2950411* | 2950411 | 2986599 | 36189 | Arthrobacter chlorophenolicus A6, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_011894:2618951 | 2618951 | 2663082 | 44132 | Methylobacterium nodulans ORS 2060, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015588:95697 | 95697 | 120567 | 24871 | Isoptericola variabilis 225 chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_004460:81687 | 81687 | 101735 | 20049 | Vibrio vulnificus CMCP6 chromosome II, complete sequence | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012791:4680500 | 4680500 | 4700019 | 19520 | Variovorax paradoxus S110 chromosome 1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003888:5443832 | 5443832 | 5464599 | 20768 | Streptomyces coelicolor A3(2), complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_007973:1821753 | 1821753 | 1847761 | 26009 | Ralstonia metallidurans CH34 chromosome 1, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014323:3292082* | 3292082 | 3319435 | 27354 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_002932:440191 | 440191 | 462405 | 22215 | Chlorobium tepidum TLS, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |