Query: NC_004463:2344128 Bradyrhizobium japonicum USDA 110, complete genome
Start: 2344128, End: 2365099, Length: 20972
Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_020453:1881904 | 1881904 | 1917206 | 35303 | Agromonas oligotrophica S58 DNA, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_013855:558831* | 558831 | 581099 | 22269 | Azospirillum sp. B510 plasmid pAB510a, complete sequence | 2e-62 | 248 | BLASTN svg | BLASTP svg |
| NC_021150:1322000 | 1322000 | 1357157 | 35158 | Azotobacter vinelandii CA6, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_012560:1322000 | 1322000 | 1357145 | 35146 | Azotobacter vinelandii DJ, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_004463:7683426 | 7683426 | 7702873 | 19448 | Bradyrhizobium japonicum USDA 110, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_003317:1030220* | 1030220 | 1053664 | 23445 | Brucella melitensis 16M chromosome I, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_010552:2454776 | 2454776 | 2487099 | 32324 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_007963:2644930 | 2644930 | 2680189 | 35260 | Chromohalobacter salexigens DSM 3043, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_013757:2858327 | 2858327 | 2877564 | 19238 | Geodermatophilus obscurus DSM 43160, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_014323:4355266 | 4355266 | 4378574 | 23309 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_011757:4293000* | 4293000 | 4338099 | 45100 | Methylobacterium chloromethanicum CM4, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| NC_010172:798923* | 798923 | 880303 | 81381 | Methylobacterium extorquens PA1, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| NC_011892:352652 | 352652 | 376099 | 23448 | Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete | 3e-27 | 131 | BLASTN svg | BLASTP svg |
| NC_011894:3161289 | 3161289 | 3204281 | 42993 | Methylobacterium nodulans ORS 2060, complete genome | 6e-72 | 280 | BLASTN svg | BLASTP svg |
| NC_008595:2546696 | 2546696 | 2584803 | 38108 | Mycobacterium avium 104, complete genome | 7e-19 | 103 | BLASTN svg | BLASTP svg |
| NC_002945:831029 | 831029 | 853656 | 22628 | Mycobacterium bovis AF2122/97, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_008769:860670 | 860670 | 879696 | 19027 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_012207:831030 | 831030 | 853609 | 22580 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_002755:831397 | 831397 | 850054 | 18658 | Mycobacterium tuberculosis CDC1551, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_009565:833076 | 833076 | 851782 | 18707 | Mycobacterium tuberculosis F11, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_009525:830513 | 830513 | 849219 | 18707 | Mycobacterium tuberculosis H37Ra, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_014414:167803 | 167803 | 185829 | 18027 | Parvularcula bermudensis HTCC2503 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_020209:2838582 | 2838582 | 2859365 | 20784 | Pseudomonas poae RE*1-1-14, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| NC_014924:2399524* | 2399524 | 2433055 | 33532 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015677:285896* | 285896 | 309706 | 23811 | Ramlibacter tataouinensis TTB310 chromosome, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_007925:3911323 | 3911323 | 3933151 | 21829 | Rhodopseudomonas palustris BisB18, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |