Pre_GI: BLASTN Hits

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Query: NC_004463:2262467 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2262467, End: 2311742, Length: 49276

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome02668BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome01899BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome0835BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome1e-31147BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome1e-25127BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome3e-23119BLASTN svgBLASTP svg
NC_003295:27873712787371282580238432Ralstonia solanacearum GMI1000, complete genome7e-18101BLASTN svgBLASTP svg
NC_013961:2579000*2579000261224833249Erwinia amylovora, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_008686:13838911383891143076746877Paracoccus denitrificans PD1222 chromosome 1, complete sequence4e-1695.6BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete2e-1593.7BLASTN svgBLASTP svg
NC_012214:1267589*1267589129886031272Erwinia pyrifoliae Ep1/96, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_013722:1785692*1785692183919253501Xanthomonas albilineans, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_009937:412302*41230243181319512Azorhizobium caulinodans ORS 571, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_007925:39337653933765395524721483Rhodopseudomonas palustris BisB18, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_007643:95536295536297459919238Rhodospirillum rubrum ATCC 11170, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_005126:31217223121722318069058969Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_005126:12650711265071131880053730Photorhabdus luminescens subsp. laumondii TTO1, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_018691:30820003082000310649724498Alcanivorax dieselolei B5 chromosome, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_021150:2546000*2546000257243726438Azotobacter vinelandii CA6, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_012560:2546000*2546000257242526426Azotobacter vinelandii DJ, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_014718:630188*63018865954429357Burkholderia rhizoxinica HKI 454 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_005126:38120543812054388079068737Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_005126:36304593630459368847858020Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_019940:86696986696988859921631Thioflavicoccus mobilis 8321 chromosome, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_014722:1467996*1467996149010322108Burkholderia rhizoxinica HKI 454, complete genome6e-0971.9BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008391:2045348*2045348207376828421Burkholderia cepacia AMMD chromosome 2, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_012724:31004303100430312207221643Burkholderia glumae BGR1 chromosome 1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012962:16616831661683171390552223Photorhabdus asymbiotica, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013194:16311341631134166791036777Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete2e-0869.9BLASTN svgBLASTP svg
NC_015376:32497733249773327345123679Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-0869.9BLASTN svgBLASTP svg
NC_002696:3759551*3759551378932829778Caulobacter crescentus CB15, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_013722:1816561*1816561186559949039Xanthomonas albilineans, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_019902:831911*83191186394132031Thioalkalivibrio nitratireducens DSM 14787, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_003919:457482*45748248039122910Xanthomonas axonopodis pv. citri str. 306, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014819:25765257655121725453Asticcacaulis excentricus CB 48 plasmid pASTEX02, complete4e-0765.9BLASTN svgBLASTP svg
NC_015593:15810715810720009941993Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete4e-0765.9BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008278:2732890*2732890278559152702Frankia alni ACN14a, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011992:37528673752867377559922733Acidovorax ebreus TPSY, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013722:850307*85030787951329207Xanthomonas albilineans, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014623:65090006509000653534226343Stigmatella aurantiaca DW4/3-1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014722:1971305*1971305199935928055Burkholderia rhizoxinica HKI 454, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015675:62763576276357633952063164Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019973:56506465650646569428443639Mesorhizobium australicum WSM2073, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020126:55586135558613560639247780Myxococcus stipitatus DSM 14675, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006155:38463153846315387119324879Yersinia pseudotuberculosis IP 32953, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_010465:86840286840289578227381Yersinia pseudotuberculosis YPIII, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012721:1052883*1052883107472021838Burkholderia glumae BGR1 chromosome 2, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_013730:25589992558999259809939101Spirosoma linguale DSM 74, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_015976:31188043118804314699128188Sphingobium sp. SYK-6, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_020304:2677372*2677372273472857357Desulfocapsa sulfexigens DSM 10523, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_020304:752012*75201277575823747Desulfocapsa sulfexigens DSM 10523, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome6e-0661.9BLASTN svgBLASTP svg