Pre_GI: BLASTN Hits

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Query: NC_004463:2118000 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2118000, End: 2140099, Length: 22100

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome03025BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome8e-173615BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome2e-59238BLASTN svgBLASTP svg
NC_019973:5838000*5838000586259924600Mesorhizobium australicum WSM2073, complete genome6e-38167BLASTN svgBLASTP svg
NC_015675:64640006464000648809924100Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-38167BLASTN svgBLASTP svg
NC_014923:59090005909000593359924600Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete6e-38167BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome5e-29137BLASTN svgBLASTP svg
NC_010125:24831222483122251620333082Gluconacetobacter diazotrophicus PAl 5, complete genome5e-29137BLASTN svgBLASTP svg
NC_010125:3771910*3771910379193620027Gluconacetobacter diazotrophicus PAl 5, complete genome5e-29137BLASTN svgBLASTP svg
NC_010125:955863*955863100278546923Gluconacetobacter diazotrophicus PAl 5, complete genome5e-29137BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome2e-28135BLASTN svgBLASTP svg
NC_014923:58680005868000589378125782Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete5e-23117BLASTN svgBLASTP svg
NC_015675:64230006423000644845225453Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_019973:57970005797000582274125742Mesorhizobium australicum WSM2073, complete genome5e-23117BLASTN svgBLASTP svg
NC_014664:3003633*3003633302609922467Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014664:16145681614568163829223725Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014664:1360524*1360524137887118348Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014664:49390049390051632122422Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014923:59701825970182600283732656Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete3e-18101BLASTN svgBLASTP svg
NC_015675:64934446493444653829644853Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_019973:5899142*5899142593179432653Mesorhizobium australicum WSM2073, complete genome3e-18101BLASTN svgBLASTP svg
NC_015563:19513681951368199617644809Delftia sp. Cs1-4 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_013446:16485561648556170768159126Comamonas testosteroni CNB-2, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_021150:2546000*2546000257243726438Azotobacter vinelandii CA6, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012560:2546000*2546000257242526426Azotobacter vinelandii DJ, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009667:1203861*1203861123386330003Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_006677:1431500*1431500145622224723Gluconobacter oxydans 621H, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015186:21656282165628218853522908Acidiphilium multivorum AIU301, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003296:16850616850618825219747Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-1177.8BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-1177.8BLASTN svgBLASTP svg
NC_006677:1596560*1596560166542268863Gluconobacter oxydans 621H, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015976:31188043118804314699128188Sphingobium sp. SYK-6, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_019892:56134365613436563638722952Singulisphaera acidiphila DSM 18658 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015186:36502*365025988323382Acidiphilium multivorum AIU301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012483:37315423731542380708575544Acidobacterium capsulatum ATCC 51196, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007406:26159162615916263852322608Nitrobacter winogradskyi Nb-255, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007406:33540003354000337855624557Nitrobacter winogradskyi Nb-255, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011757:44453434445343447709931757Methylobacterium chloromethanicum CM4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_016023:579000*57900060677027771Bacillus coagulans 36D1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011146:34265003426500347858852089Geobacter bemidjiensis Bem, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003919:29564042956404297807421671Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006677:15035131503513153027026758Gluconobacter oxydans 621H, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006677:215466*21546625730741842Gluconobacter oxydans 621H, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006677:2402282*2402282243318430903Gluconobacter oxydans 621H, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006677:2575345*2575345259598120637Gluconobacter oxydans 621H, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015057:36190236190238409922198Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_006834:13950013950015810918610Xanthomonas oryzae pv. oryzae KACC10331, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010717:12950012950015009920600Xanthomonas oryzae pv. oryzae PXO99A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete4e-0867.9BLASTN svgBLASTP svg
NC_014836:1052214*1052214107658924376Desulfurispirillum indicum S5 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_016027:1401500*1401500141909917600Gluconacetobacter xylinus NBRC 3288, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015160:43566864356686437814521460Odoribacter splanchnicus DSM 20712 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011768:1718869*1718869178184662978Desulfatibacillum alkenivorans AK-01, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:49914104991410501909927690Xanthomonas campestris pv. campestris, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007086:50640535064053508925125199Xanthomonas campestris pv. campestris str. 8004, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003902:49898554989855501656626712Xanthomonas campestris pv. campestris str. ATCC 33913, complete7e-0763.9BLASTN svgBLASTP svg
NC_007406:85762585762588729129667Nitrobacter winogradskyi Nb-255, complete genome3e-0661.9BLASTN svgBLASTP svg